Andreas Tille pushed to branch master at Debian Med / parsinsert
Commits: 7203c2af by Andreas Tille at 2019-12-04T15:27:53Z Run command from autopkgtest also as runtime-test to spot issues for certain architectures earlier - - - - - dc2f0d10 by Andreas Tille at 2019-12-04T15:28:11Z debhelper-compat 12 - - - - - 6b9029dd by Andreas Tille at 2019-12-04T15:28:14Z Standards-Version: 4.4.1 - - - - - 31435f7e by Andreas Tille at 2019-12-04T15:28:14Z Secure URI in copyright format - - - - - 53566247 by Andreas Tille at 2019-12-04T15:28:33Z Respect DEB_BUILD_OPTIONS in override_dh_auto_test target - - - - - fd486466 by Andreas Tille at 2019-12-04T15:28:33Z Remove trailing whitespace in debian/changelog - - - - - 8213c0f1 by Andreas Tille at 2019-12-04T15:28:38Z Use secure URI in debian/watch. Fixes lintian: debian-watch-uses-insecure-uri See https://lintian.debian.org/tags/debian-watch-uses-insecure-uri.html for more details. - - - - - 1fae9b23 by Andreas Tille at 2019-12-04T15:28:49Z Set upstream metadata fields: Archive. - - - - - 39bb9a5e by Andreas Tille at 2019-12-04T15:36:26Z Upload to unstable - - - - - 8 changed files: - debian/README.source - debian/changelog - − debian/compat - debian/control - debian/copyright - debian/rules - debian/upstream/metadata - debian/watch Changes: ===================================== debian/README.source ===================================== @@ -1,12 +1,11 @@ parsinsert for Debian ===================== -Usually we try to run thge upstream test suite. However, the upstream -tarball is missing the file Test.cpp so we can not run this. Upstream -is informed and we try to deliver the package including the test suite -in the future. +Usually we try to run the upstream test suite. However, the upstream +tarball is missing the file Test.cpp so we can not run this. Instead +the autopkgtest command is used as build time test. - -- Andreas Tille <[email protected]> Thu, 27 Feb 2014 16:50:26 +0000 + -- Andreas Tille <[email protected]> Wed, 04 Dec 2019 16:26:00 +0100 The files in debian/tests/test_data was retrieved sourceforge URL: https://sourceforge.net/projects/parsinsert/files ===================================== debian/changelog ===================================== @@ -1,3 +1,17 @@ +parsinsert (1.04-5) unstable; urgency=medium + + * Run command from autopkgtest also as runtime-test to spot issues + for certain architectures earlier + * debhelper-compat 12 + * Standards-Version: 4.4.1 + * Secure URI in copyright format + * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target + * Remove trailing whitespace in debian/changelog + * Use secure URI in debian/watch. + * Set upstream metadata fields: Archive. + + -- Andreas Tille <[email protected]> Wed, 04 Dec 2019 16:28:50 +0100 + parsinsert (1.04-4) unstable; urgency=medium * debhelper 11 @@ -9,7 +23,7 @@ parsinsert (1.04-4) unstable; urgency=medium parsinsert (1.04-3) unstable; urgency=medium * Team upload. - + [ Nadiya Sitdykova ] * add autopkgtest test * add info about source of test_data ===================================== debian/compat deleted ===================================== @@ -1 +0,0 @@ -11 ===================================== debian/control ===================================== @@ -4,8 +4,8 @@ Uploaders: Tim Booth <[email protected]>, Andreas Tille <[email protected]> Section: science Priority: optional -Build-Depends: debhelper (>= 11~) -Standards-Version: 4.2.1 +Build-Depends: debhelper-compat (= 12) +Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/parsinsert Vcs-Git: https://salsa.debian.org/med-team/parsinsert.git Homepage: http://sourceforge.net/projects/parsinsert/ ===================================== debian/copyright ===================================== @@ -1,4 +1,4 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: ParsInsert Upstream-Contact: David Knox <[email protected]> Source: http://parsinsert.sourceforge.net ===================================== debian/rules ===================================== @@ -16,7 +16,12 @@ override_dh_auto_clean: dh_auto_clean override_dh_auto_test: - echo "Upstream tarball lacks Test.cpp so we can not run the test." +ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) + cd debian/tests/test_data && \ + $(CURDIR)/parsinsert -d0 -c80 -n1 set1000.fasta -m lanemask.txt -x rdp.taxonomy \ + -l set1000.log -o set1000.results -t core_rdp.ntree \ + -s core_rdp.fasta +endif # Note a manpage was generated using: # help2man -N ./parsinsert --version-string=1.04 > debian/parsinsert.1 ===================================== debian/upstream/metadata ===================================== @@ -1,7 +1,8 @@ Registry: - - Name: OMICtools - Entry: OMICS_21460 - - Name: SciCrunch - Entry: NA - - Name: bio.tools - Entry: NA +- Name: OMICtools + Entry: OMICS_21460 +- Name: SciCrunch + Entry: NA +- Name: bio.tools + Entry: NA +Archive: SourceForge ===================================== debian/watch ===================================== @@ -1,2 +1,2 @@ version=3 -http://sf.net/parsinsert/ParsInsert\.([\d\.]+)\.tgz +https://sf.net/parsinsert/ParsInsert\.([\d\.]+)\.tgz View it on GitLab: https://salsa.debian.org/med-team/parsinsert/compare/bd39eade1c8ddbc0703416f20756424ef0d3c233...39bb9a5ecc762b2c25770603a532bd8835356ee1 -- View it on GitLab: https://salsa.debian.org/med-team/parsinsert/compare/bd39eade1c8ddbc0703416f20756424ef0d3c233...39bb9a5ecc762b2c25770603a532bd8835356ee1 You're receiving this email because of your account on salsa.debian.org.
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