Andreas Tille pushed to branch master at Debian Med / blasr
Commits: 9dddbfce by Andreas Tille at 2020-01-15T11:16:50+01:00 Build-Depends: s/python/python3/ - - - - - 18a705b7 by Andreas Tille at 2020-01-15T11:17:14+01:00 routine-update: Standards-Version: 4.4.1 - - - - - 5c9b0f15 by Andreas Tille at 2020-01-15T11:23:39+01:00 Build-Depends: cmake - - - - - a6c22aa3 by Andreas Tille at 2020-01-15T15:19:22+01:00 Do not check for pbbam with meson - its ensured by Build-Depends; Build-Depends: libpbcopper-dev - - - - - 3 changed files: - debian/changelog - debian/control - debian/patches/use_debian_packaged_pblibs.patch Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,13 @@ +blasr (5.3.3+dfsg-3) UNRELEASED; urgency=medium + + * Build-Depends: s/python/python3/ + * Standards-Version: 4.4.1 + * Build-Depends: cmake + * Do not check for pbbam with meson - its ensured by Build-Depends + * Build-Depends: libpbcopper-dev + + -- Andreas Tille <[email protected]> Wed, 15 Jan 2020 11:16:19 +0100 + blasr (5.3.3+dfsg-2) unstable; urgency=medium * Use 2to3 to port to Python3 ===================================== debian/control ===================================== @@ -4,8 +4,9 @@ Uploaders: Andreas Tille <[email protected]> Section: science Priority: optional Build-Depends: debhelper-compat (= 12), - python, + python3, meson, + cmake, pkg-config, libboost-dev, libhdf5-dev, @@ -13,9 +14,10 @@ Build-Depends: debhelper-compat (= 12), libpbseq-dev, libpbbam-dev (>= 0.18.0~), libpbdata-dev, + libpbcopper-dev, libgtest-dev, libblasr-dev (>= 5.3.1+dfsg-2) -Standards-Version: 4.4.0 +Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/blasr Vcs-Git: https://salsa.debian.org/med-team/blasr.git Homepage: https://github.com/PacificBiosciences/blasr ===================================== debian/patches/use_debian_packaged_pblibs.patch ===================================== @@ -9,7 +9,7 @@ Description: Add some missing libraries to linker # pbbam -blasr_pbbam_dep = dependency('pbbam', fallback : ['pbbam', 'pbbam_dep']) -+blasr_pbbam_dep = dependency('pbbam', required : true) ++# blasr_pbbam_dep = dependency('pbbam', required : true) # libblasr -blasr_libblasr_dep = dependency('libblasr', fallback : ['blasr_libcpp', 'libblasr_dep']) @@ -23,7 +23,7 @@ Description: Add some missing libraries to linker +samwriter_pbdata_deps = cpp.find_library('pbdata') +blasr_pbihdf_deps = cpp.find_library('pbihdf') + -+blasr_deps = [blasr_thread_dep, blasr_boost_dep, blasr_pbbam_dep, blasr_libblasr_dep, blasr_zlib_dep, samwriter_pbdata_deps, blasr_pbihdf_deps] ++blasr_deps = [blasr_thread_dep, blasr_boost_dep, blasr_libblasr_dep, blasr_zlib_dep, samwriter_pbdata_deps, blasr_pbihdf_deps] ######################## # sources + executable # View it on GitLab: https://salsa.debian.org/med-team/blasr/compare/61a9321fd3e29b1e6c05346bff234f8cdf082ed9...a6c22aa349a5a115c72b2647b8d128eee58c457e -- View it on GitLab: https://salsa.debian.org/med-team/blasr/compare/61a9321fd3e29b1e6c05346bff234f8cdf082ed9...a6c22aa349a5a115c72b2647b8d128eee58c457e You're receiving this email because of your account on salsa.debian.org.
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