Andreas Tille pushed to branch master at Debian Med / bbmap
Commits: 387e5503 by Andreas Tille at 2020-02-27T11:27:53+01:00 routine-update: New upstream version - - - - - 7e91981b by Andreas Tille at 2020-02-27T11:27:55+01:00 New upstream version 38.79+dfsg - - - - - 6676b63a by Andreas Tille at 2020-02-27T11:28:07+01:00 Update upstream source from tag 'upstream/38.79+dfsg' Update to upstream version '38.79+dfsg' with Debian dir 77a61c145ab2652f2f6088be08698f2aa7550b2d - - - - - ca80f045 by Andreas Tille at 2020-02-27T11:28:08+01:00 routine-update: Standards-Version: 4.5.0 - - - - - 01fe0066 by Andreas Tille at 2020-02-27T11:28:19+01:00 routine-update: Add salsa-ci file - - - - - 092306bc by Andreas Tille at 2020-02-27T11:34:46+01:00 routine-update: Ready to upload to unstable - - - - - 30 changed files: - README.md - addssu.sh - + alltoall.sh - + analyzesketchresults.sh - bbmap.sh - bbwrap.sh - calcmem.sh - callgenes.sh - comparesketch.sh - + comparessu.sh - consensus.sh - current/align2/AbstractMapper.java - current/align2/BBMap.java - current/align2/BBSplitter.java - current/align2/BBWrap.java - current/align2/RandomReads3.java - current/pacbio/Aligner.java → current/aligner/Aligner.java - current/prok/Alignment.java → current/aligner/Alignment.java - current/pacbio/AlignmentResult.java → current/aligner/AlignmentResult.java - + current/aligner/AllToAll.java - current/pacbio/FlatAligner.java → current/aligner/FlatAligner.java - current/pacbio/MultiStateAligner9PacBioAdapter.java → current/aligner/MultiStateAligner9PacBioAdapter.java - current/pacbio/MultiStateAligner9PacBioAdapter2.java → current/aligner/MultiStateAligner9PacBioAdapter2.java - current/pacbio/MultiStateAligner9PacBioAdapter3.java → current/aligner/MultiStateAligner9PacBioAdapter3.java - current/pacbio/MultiStateAligner9PacBioAdapter_WithBarriers.java → current/aligner/MultiStateAligner9PacBioAdapter_WithBarriers.java - current/pacbio/SingleStateAlignerFlat.java → current/aligner/SingleStateAlignerFlat.java - current/pacbio/SingleStateAlignerFlat2.java → current/aligner/SingleStateAlignerFlat2.java - current/pacbio/SingleStateAlignerFlat2Amino.java → current/aligner/SingleStateAlignerFlat2Amino.java - current/pacbio/SingleStateAlignerFlat2_1D.java → current/aligner/SingleStateAlignerFlat2_1D.java - + current/aligner/SingleStateAlignerFlat3.java The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/258ce1dc979a313307ee93326ad8764f4d9c1902...092306bceed430b5cd31b75a754de5b7afd19825 -- View it on GitLab: https://salsa.debian.org/med-team/bbmap/-/compare/258ce1dc979a313307ee93326ad8764f4d9c1902...092306bceed430b5cd31b75a754de5b7afd19825 You're receiving this email because of your account on salsa.debian.org.
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