Andreas Tille pushed to branch master at Debian Med / hinge
Commits: 929ac17d by Andreas Tille at 2020-03-19T18:18:30+01:00 Fix FTBFS against spdlog 1.5.0 - - - - - 06a58d6a by Andreas Tille at 2020-03-19T18:18:41+01:00 routine-update: Standards-Version: 4.5.0 - - - - - 664359fc by Andreas Tille at 2020-03-19T18:18:49+01:00 routine-update: Add salsa-ci file - - - - - 49bfec86 by Andreas Tille at 2020-03-19T18:18:49+01:00 routine-update: Rules-Requires-Root: no - - - - - 0a104d82 by Andreas Tille at 2020-03-19T18:18:50+01:00 Set upstream metadata fields: Bug-Database, Bug-Submit, Repository. - - - - - 2786d27d by Andreas Tille at 2020-03-19T18:22:05+01:00 Upload to unstable - - - - - 6 changed files: - debian/changelog - debian/control - debian/patches/series - + debian/patches/spdlog-1.5.0.patch - + debian/salsa-ci.yml - debian/upstream/metadata Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,16 @@ +hinge (0.5.0-6) unstable; urgency=medium + + [ Gilles Filippini ] + * Fix FTBFS against spdlog 1.5.0 (closes: #952615) + + [ Andreas Tille ] + * Standards-Version: 4.5.0 (routine-update) + * Add salsa-ci file (routine-update) + * Rules-Requires-Root: no (routine-update) + * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository. + + -- Andreas Tille <[email protected]> Thu, 19 Mar 2020 18:18:50 +0100 + hinge (0.5.0-5) unstable; urgency=medium * Afif removed himself from Uploaders ===================================== debian/control ===================================== @@ -23,10 +23,11 @@ Build-Depends: debhelper-compat (= 12), python3-pbcore, python3-networkx, python3-matplotlib -Standards-Version: 4.4.1 +Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/hinge Vcs-Git: https://salsa.debian.org/med-team/hinge.git Homepage: https://github.com/HingeAssembler/HINGE +Rules-Requires-Root: no Package: hinge Architecture: any ===================================== debian/patches/series ===================================== @@ -2,3 +2,4 @@ external-spdlog.patch libspdlog-14.0.patch libspdlog-1:1.3.0 2to3.patch +spdlog-1.5.0.patch ===================================== debian/patches/spdlog-1.5.0.patch ===================================== @@ -0,0 +1,62 @@ +Description: Fix FTBFS against spdlog 1.5.0 +Bug-Debian: https://bugs.debian.org/952615 +Author: Gilles Filippini <[email protected]> +Last-Update: Thu, 19 Mar 2020 17:07:48 +0100 + +Index: hinge-0.5.0/src/consensus/CMakeLists.txt +=================================================================== +--- hinge-0.5.0.orig/src/consensus/CMakeLists.txt ++++ hinge-0.5.0/src/consensus/CMakeLists.txt +@@ -1,9 +1,10 @@ + cmake_minimum_required(VERSION 3.2) + ++add_definitions(-DSPDLOG_FMT_EXTERNAL) + add_executable(draft_assembly draft) +-target_link_libraries(draft_assembly LAInterface ini falcon ) ++target_link_libraries(draft_assembly fmt LAInterface ini falcon ) + + add_executable(consensus consensus.cpp) +-target_link_libraries(consensus LAInterface falcon ini) ++target_link_libraries(consensus fmt LAInterface falcon ini) + + install(TARGETS draft_assembly consensus DESTINATION ${libexec}) +Index: hinge-0.5.0/src/filter/CMakeLists.txt +=================================================================== +--- hinge-0.5.0.orig/src/filter/CMakeLists.txt ++++ hinge-0.5.0/src/filter/CMakeLists.txt +@@ -1,6 +1,7 @@ + cmake_minimum_required(VERSION 3.2) + ++add_definitions(-DSPDLOG_FMT_EXTERNAL) + add_executable(Reads_filter filter) +-target_link_libraries(Reads_filter LAInterface ini ) ++target_link_libraries(Reads_filter fmt LAInterface ini ) + + install(TARGETS Reads_filter DESTINATION ${libexec}) +Index: hinge-0.5.0/src/layout/CMakeLists.txt +=================================================================== +--- hinge-0.5.0.orig/src/layout/CMakeLists.txt ++++ hinge-0.5.0/src/layout/CMakeLists.txt +@@ -5,7 +5,8 @@ set(Boost_USE_STATIC_LIBS ON) + FIND_PACKAGE( Boost COMPONENTS graph REQUIRED ) + INCLUDE_DIRECTORIES( ${Boost_INCLUDE_DIR} ) + ++add_definitions(-DSPDLOG_FMT_EXTERNAL) + add_executable(hinging hinging) +-target_link_libraries(hinging LAInterface ini ${Boost_LIBRARIES}) ++target_link_libraries(hinging fmt LAInterface ini ${Boost_LIBRARIES}) + + install(TARGETS hinging DESTINATION ${libexec}) +Index: hinge-0.5.0/src/maximal/CMakeLists.txt +=================================================================== +--- hinge-0.5.0.orig/src/maximal/CMakeLists.txt ++++ hinge-0.5.0/src/maximal/CMakeLists.txt +@@ -1,6 +1,7 @@ + cmake_minimum_required(VERSION 3.2) + ++add_definitions(-DSPDLOG_FMT_EXTERNAL) + add_executable(get_maximal_reads maximal) +-target_link_libraries(get_maximal_reads LAInterface ini ) ++target_link_libraries(get_maximal_reads fmt LAInterface ini ) + + install(TARGETS get_maximal_reads DESTINATION ${libexec}) ===================================== debian/salsa-ci.yml ===================================== @@ -0,0 +1,4 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml ===================================== debian/upstream/metadata ===================================== @@ -1,3 +1,5 @@ +Bug-Database: https://github.com/HingeAssembler/HINGE/issues +Bug-Submit: https://github.com/HingeAssembler/HINGE/issues/new Reference: Author: > Govinda M Kamath and Ilan Shomorony and Fei Xia and Thomas Courtade @@ -17,5 +19,5 @@ Registry: Entry: NA - Name: SciCrunch Entry: NA -Repository: https://github.com/HingeAssembler/HINGE +Repository: https://github.com/HingeAssembler/HINGE.git Repository-Browse: https://github.com/HingeAssembler/HINGE View it on GitLab: https://salsa.debian.org/med-team/hinge/-/compare/94c3ea1318bdb83402da2d4c948bc515bf5e6881...2786d27d88f9b610afe575649428d91f5c766895 -- View it on GitLab: https://salsa.debian.org/med-team/hinge/-/compare/94c3ea1318bdb83402da2d4c948bc515bf5e6881...2786d27d88f9b610afe575649428d91f5c766895 You're receiving this email because of your account on salsa.debian.org.
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