Andreas Tille pushed to branch master at Debian Med / fieldbioinformatics
Commits: 8e699457 by Andreas Tille at 2020-06-23T14:10:26+02:00 Upload to new - - - - - 06e1c2a8 by Andreas Tille at 2020-06-23T15:12:27+02:00 Shorter synopsis - - - - - 42dd4821 by Andreas Tille at 2020-06-23T15:48:51+02:00 Fix DEP5 - - - - - b396c4fc by Andreas Tille at 2020-06-23T15:49:08+02:00 Make sure package fieldbioinformatics will not remain empty - - - - - 4 changed files: - debian/changelog - debian/control - debian/copyright - debian/rules Changes: ===================================== debian/changelog ===================================== @@ -1,6 +1,5 @@ -fieldbioinformatics (1.1.3-1) unstable; urgency=medium +fieldbioinformatics (1.1.3-1) UNRELEASED; urgency=medium * Initial release (Closes: #963530) - * New upstream release -- Malihe Asemani <[email protected]> Tue, 16 Jun 2020 22:25:27 +0430 ===================================== debian/control ===================================== @@ -16,7 +16,7 @@ Package: fieldbioinformatics Architecture: all Depends: ${python3:Depends}, ${misc:Depends} -Description: pipeline for working with virus sequencing data sequenced with nanopore +Description: pipeline with virus sequencing data sequenced with nanopore This is the ARTIC bioinformatics pipeline for working with virus sequencing data, sequenced with nanopore. Nanopore is a complete bioinformatics protocol to take the output from the sequencing protocol to consensus @@ -28,7 +28,7 @@ Architecture: all Depends: ${python3:Depends}, ${misc:Depends} Enhances: fieldbioinformatics -Description: pipeline for working with virus sequencing data sequenced with nanopore (examples) +Description: pipeline for virus sequencing data sequenced with nanopore (examples) This is the ARTIC bioinformatics pipeline for working with virus sequencing data, sequenced with nanopore. Nanopore is a complete bioinformatics protocol to take the output from the sequencing protocol to consensus ===================================== debian/copyright ===================================== @@ -8,6 +8,8 @@ License: MIT Files: debian/* Copyright: 2020 Malihe Asemani <[email protected]> +License: MIT + License: MIT Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal @@ -25,4 +27,4 @@ License: MIT AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE - SOFTWARE. \ No newline at end of file + SOFTWARE. ===================================== debian/rules ===================================== @@ -11,6 +11,13 @@ export PYBUILD_NAME=fieldbioinformatics %: dh $@ --with python3 --buildsystem=pybuild +override_dh_auto_install: + dh_auto_install + # FIXME: Hmmmm, no idea why this dirty hack is needed but files are + # installed like into a python3 modules package + mv debian/python3-$(PYBUILD_NAME)/* debian/$(PYBUILD_NAME) + rmdir debian/python3-$(PYBUILD_NAME) + override_dh_auto_test: ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) echo "Test is downloading extra data and thus can not be running here" View it on GitLab: https://salsa.debian.org/med-team/fieldbioinformatics/-/compare/ae338338e9c3435fbdbaa8907f9c7cf4eca5267a...b396c4fce7ac9ebbc936bf80bc21181b08fa6710 -- View it on GitLab: https://salsa.debian.org/med-team/fieldbioinformatics/-/compare/ae338338e9c3435fbdbaa8907f9c7cf4eca5267a...b396c4fce7ac9ebbc936bf80bc21181b08fa6710 You're receiving this email because of your account on salsa.debian.org.
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