Andreas Tille pushed to branch master at Debian Med / bcftools
Commits: 603e4aa4 by Andreas Tille at 2020-07-14T22:20:54+02:00 Fix suggested Python packages - - - - - 80e49cc0 by Andreas Tille at 2020-07-14T22:38:57+02:00 Make sure Python3 is used - - - - - f6cbc840 by Andreas Tille at 2020-07-14T22:42:11+02:00 Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/control - + debian/patches/2to3.patch - debian/patches/series Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,10 @@ +bcftools (1.10.2-4) unstable; urgency=medium + + * Fix suggested Python packages + Closes: #965032 + + -- Andreas Tille <[email protected]> Tue, 14 Jul 2020 22:39:24 +0200 + bcftools (1.10.2-3) unstable; urgency=medium * Team upload. ===================================== debian/control ===================================== @@ -25,9 +25,9 @@ Depends: ${shlibs:Depends}, Recommends: perl Suggests: # These are needed for plot-vcfstats - python, - python-numpy, - python-matplotlib, + python3, + python3-numpy, + python3-matplotlib, texlive-latex-recommended Breaks: samtools (<< 1.0) Replaces: samtools (<< 1.0) ===================================== debian/patches/2to3.patch ===================================== @@ -0,0 +1,34 @@ +Author: Andreas Tille <[email protected]> +Last-Update: Tue, 14 Jul 2020 22:21:56 +0200 +Bug-Debian: https://bugs.debian.org/965032 +Description: Make sure Python3 is used + +diff --git a/misc/guess-ploidy.py b/misc/guess-ploidy.py +index 6ad3d36..6792498 100755 +--- a/misc/guess-ploidy.py ++++ b/misc/guess-ploidy.py +@@ -1,4 +1,4 @@ +-#!/usr/bin/env python ++#!/usr/bin/env python3 + # + # Plot the output of "bcftools +guess-ploidy -v" + # +@@ -24,7 +24,7 @@ + # FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER + # DEALINGS IN THE SOFTWARE. + +-from __future__ import print_function ++ + + import matplotlib as mpl + mpl.use('Agg') +diff --git a/misc/plot-roh.py b/misc/plot-roh.py +index 90dd63e..210f086 100755 +--- a/misc/plot-roh.py ++++ b/misc/plot-roh.py +@@ -1,4 +1,4 @@ +-#!/usr/bin/env python ++#!/usr/bin/env python3 + # + # The MIT License + # ===================================== debian/patches/series ===================================== @@ -1,2 +1,3 @@ tests-pluginpath.patch skip_new_test_failing_on_32bit.patch +2to3.patch View it on GitLab: https://salsa.debian.org/med-team/bcftools/-/compare/460295209687734c243be802d3052b31241f3896...f6cbc84068345edae26d10749a1048081bb85415 -- View it on GitLab: https://salsa.debian.org/med-team/bcftools/-/compare/460295209687734c243be802d3052b31241f3896...f6cbc84068345edae26d10749a1048081bb85415 You're receiving this email because of your account on salsa.debian.org.
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