Andreas Tille pushed to branch master at Debian Med / trinityrnaseq
Commits: 13d005c5 by Andreas Tille at 2020-08-05T12:47:31+02:00 Fix gcc-10 build issue - - - - - ece6e42c by Andreas Tille at 2020-08-05T12:56:19+02:00 routine-update: New upstream version - - - - - c7463370 by Andreas Tille at 2020-08-05T12:56:34+02:00 New upstream version 2.11.0+dfsg - - - - - f3d13e15 by Andreas Tille at 2020-08-05T13:02:44+02:00 Update upstream source from tag 'upstream/2.11.0+dfsg' Update to upstream version '2.11.0+dfsg' with Debian dir 60247192462fedb615822b8e49e12b043c309e64 - - - - - ec6e4917 by Andreas Tille at 2020-08-05T13:02:46+02:00 routine-update: debhelper-compat 13 - - - - - 483b0895 by Andreas Tille at 2020-08-05T13:33:23+02:00 Adapt patches - - - - - 4f6ba3fe by Andreas Tille at 2020-08-05T13:40:12+02:00 Review Files-Excluded for moved and removed files as well as new binary *.jars - - - - - 7150f569 by Andreas Tille at 2020-08-05T13:40:43+02:00 Remove redundant debian/gbp.conf - - - - - 15965297 by Andreas Tille at 2020-08-05T13:50:46+02:00 New upstream version 2.11.0+dfsg - - - - - 26fc1729 by Andreas Tille at 2020-08-05T13:55:05+02:00 Update upstream source from tag 'upstream/2.11.0+dfsg' Update to upstream version '2.11.0+dfsg' with Debian dir e608f7e9ef67b323c97fab82f1d95cb9142fcc24 - - - - - bd24bf69 by Andreas Tille at 2020-08-05T14:55:47+02:00 Remove __pycache__ from installed package - - - - - 915d8883 by Andreas Tille at 2020-08-05T15:00:45+02:00 More Python3 porting needed - - - - - f14d07c7 by Andreas Tille at 2020-08-05T15:01:05+02:00 Remove more binary code from upstream source - - - - - 0d1d8e6c by Andreas Tille at 2020-08-05T15:49:37+02:00 New upstream version 2.11.0+dfsg - - - - - 449ca8fa by Andreas Tille at 2020-08-05T15:53:52+02:00 Update upstream source from tag 'upstream/2.11.0+dfsg' Update to upstream version '2.11.0+dfsg' with Debian dir 8971919319e287bc0b6c7a7ce583e6d7f5b260ec - - - - - 0d455157 by Andreas Tille at 2020-08-05T16:31:12+02:00 FIXME: seqtk-trinity is missing and thus autopkgtest fails - - - - - 30 changed files: - .gitmodules - Analysis/DifferentialExpression/PtR - Analysis/SuperTranscripts/Trinity_gene_splice_modeler.py - + Analysis/SuperTranscripts/pylib/__pycache__/Compact_graph_partial.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Compact_graph_pruner.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Compact_graph_whole.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/DP_matrix.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Gene_splice_modeler.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/GraphCycleException.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Node_alignment.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Node_path.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Splice_model_refiner.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/TGLOBALS.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/TGraph.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/TNode.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Topological_sort.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Trinity_fasta_parser.cpython-36.pyc - + Analysis/SuperTranscripts/pylib/__pycache__/Trinity_util.cpython-36.pyc - + Butterfly/Butterfly/README.md - + Butterfly/Butterfly/src/.classpath - + Butterfly/Butterfly/src/.err - + Butterfly/Butterfly/src/.project - + Butterfly/Butterfly/src/.settings/org.eclipse.jdt.core.prefs - + Butterfly/Butterfly/src/README - + Butterfly/Butterfly/src/_t_seqA.fa - + Butterfly/Butterfly/src/_t_seqB.fa - + Butterfly/Butterfly/src/build.xml - + Butterfly/Butterfly/src/runExample.sh - + Butterfly/Butterfly/src/run_NWalign.sh - + Butterfly/Butterfly/src/run_butterfly_nonJar.sh The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/compare/f915893af3ba3736372603cfb5865d52728bb98c...0d455157ba524208cb84b6d9b8d17a1756d6ce40 -- View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/compare/f915893af3ba3736372603cfb5865d52728bb98c...0d455157ba524208cb84b6d9b8d17a1756d6ce40 You're receiving this email because of your account on salsa.debian.org.
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