Andreas Tille pushed to branch master at Debian Med / biosquid
Commits: afb73a16 by Andreas Tille at 2020-08-12T11:18:28+02:00 Disable pvm - - - - - 1f6f5e7f by Andreas Tille at 2020-08-12T11:19:56+02:00 routine-update: Standards-Version: 4.5.0 - - - - - 2edf2316 by Andreas Tille at 2020-08-12T11:19:56+02:00 routine-update: debhelper-compat 13 - - - - - ca224f77 by Andreas Tille at 2020-08-12T11:22:54+02:00 routine-update: Respect DEB_BUILD_OPTIONS in override_dh_auto_test target - - - - - b3b0cea7 by Andreas Tille at 2020-08-12T11:22:54+02:00 routine-update: autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g - - - - - 656c1041 by Andreas Tille at 2020-08-12T11:22:55+02:00 routine-update: Add salsa-ci file - - - - - 1df82314 by Andreas Tille at 2020-08-12T11:22:55+02:00 routine-update: Rules-Requires-Root: no - - - - - 078f088b by Andreas Tille at 2020-08-12T11:22:55+02:00 Trim trailing whitespace. Changes-By: lintian-brush Fixes: lintian: trailing-whitespace See-also: https://lintian.debian.org/tags/trailing-whitespace.html - - - - - c9f9197a by Andreas Tille at 2020-08-12T11:23:00+02:00 Refer to specific version of license GPL-2. Changes-By: lintian-brush Fixes: lintian: copyright-refers-to-symlink-license See-also: https://lintian.debian.org/tags/copyright-refers-to-symlink-license.html Fixes: lintian: copyright-refers-to-versionless-license-file See-also: https://lintian.debian.org/tags/copyright-refers-to-versionless-license-file.html - - - - - 7 changed files: - debian/changelog - − debian/compat - debian/control - debian/copyright - debian/rules - + debian/salsa-ci.yml - debian/tests/run-unit-test Changes: ===================================== debian/changelog ===================================== @@ -1,9 +1,23 @@ biosquid (1.9g+cvs20050121-12) UNRELEASED; urgency=medium + [ Jelmer Vernooij ] * Use secure copyright file specification URI. * Trim trailing whitespace. - -- Jelmer Vernooij <[email protected]> Sat, 20 Oct 2018 13:16:22 +0000 + [ Andreas Tille ] + * Disable pvm (see + https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=957717#17 ) + * Standards-Version: 4.5.0 (routine-update) + * debhelper-compat 13 (routine-update) + * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine- + update) + * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update) + * Add salsa-ci file (routine-update) + * Rules-Requires-Root: no (routine-update) + * Trim trailing whitespace. + * Refer to specific version of license GPL-2. + + -- Andreas Tille <[email protected]> Wed, 12 Aug 2020 11:14:11 +0200 biosquid (1.9g+cvs20050121-11) unstable; urgency=medium @@ -131,4 +145,3 @@ biosquid (1.9g+cvs20050121-1) unstable; urgency=low * Initial release (Closes: #319945). -- Nelson A. de Oliveira <[email protected]> Sat, 5 Aug 2006 01:03:52 -0300 - ===================================== debian/compat deleted ===================================== @@ -1 +0,0 @@ -11 ===================================== debian/control ===================================== @@ -3,13 +3,13 @@ Maintainer: Debian-Med Packaging Team <[email protected]. Uploaders: Andreas Tille <[email protected]> Section: science Priority: optional -Build-Depends: debhelper (>= 11~), - d-shlibs, - pvm-dev -Standards-Version: 4.2.0 +Build-Depends: debhelper-compat (= 13), + d-shlibs +Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/biosquid Vcs-Git: https://salsa.debian.org/med-team/biosquid.git Homepage: http://eddylab.org/software.html +Rules-Requires-Root: no Package: biosquid Architecture: any ===================================== debian/copyright ===================================== @@ -44,10 +44,9 @@ License: GPL-2 General Public License for more details. . On Debian systems, the complete text of the GNU General - Public License can be found in `/usr/share/common-licenses/GPL'. + Public License can be found in `/usr/share/common-licenses/GPL-2'. Files: debian/* Copyright: © 2005-2008 Nelson A. de Oliveira <[email protected]> 2008-2014 Andreas Tille <[email protected]> License: GPL-2 - ===================================== debian/rules ===================================== @@ -18,7 +18,7 @@ override_dh_auto_clean: override_dh_auto_configure: # autoreconf && true autoconf - dh_auto_configure -- --enable-lfs --enable-pvm + dh_auto_configure -- --enable-lfs # --enable-pvm # avoid duplicated definition of PACKAGE_NAME (basically conflicting with hmmer2 when used together) sed -i -e '/^#define PACKAGE_NAME /i #ifndef PACKAGE_NAME' \ -e '/^#define PACKAGE_NAME /a #endif' \ @@ -39,7 +39,6 @@ override_dh_install: --multiarch \ --devunversioned \ --exclude-la \ - --override s/libpvm3-3-dev/pvm-dev/ \ --movedev debian/tmp/usr/include/* usr/include \ --movedev squid.h usr/include/$(DEB_SOURCE) \ --movedev squidconf.h usr/include/$(DEB_SOURCE) \ @@ -61,9 +60,11 @@ override_dh_installexamples: sed -i 's#/usr/local/bin/perl#/usr/bin/perl#' $(CURDIR)/debian/$(LIBNAME)-dev/usr/share/doc/$(LIBNAME)-dev/examples/Formats/*.pl override_dh_auto_test: +ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) chmod u+x Testsuite/x-base-* Testsuite/bug-1-sfetch* ln -s .libs/libsquid.a dh_auto_test +endif override_dh_installman: dh_installman ===================================== debian/salsa-ci.yml ===================================== @@ -0,0 +1,4 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml ===================================== debian/tests/run-unit-test ===================================== @@ -11,12 +11,12 @@ TOOLS="afetch sreformat " -if [ "$ADTTMP" = "" ] ; then - ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX` - trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM +if [ "$AUTOPKGTEST_TMP" = "" ] ; then + AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX` + trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM fi -cd $ADTTMP -cp -a /usr/share/doc/libsquid-dev/examples/* $ADTTMP +cd $AUTOPKGTEST_TMP +cp -a /usr/share/doc/libsquid-dev/examples/* $AUTOPKGTEST_TMP find . -name "*.gz" -exec gunzip \{\} \; cd Testsuite sed -i 's#-I../#-I/usr/include/biosquid#' Makefile View it on GitLab: https://salsa.debian.org/med-team/biosquid/-/compare/f6b147f3933aede78d97f6aaa808c37ea888d215...c9f9197a04c488b7eba201f10c6a10fc2ca06498 -- View it on GitLab: https://salsa.debian.org/med-team/biosquid/-/compare/f6b147f3933aede78d97f6aaa808c37ea888d215...c9f9197a04c488b7eba201f10c6a10fc2ca06498 You're receiving this email because of your account on salsa.debian.org.
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