Andreas Tille pushed to branch master at Debian Med / centrifuge
Commits: f2b5419e by Andreas Tille at 2020-11-07T20:16:56+01:00 Fix code to build on arm64 - - - - - 43c60e3e by Andreas Tille at 2020-11-07T20:18:58+01:00 Upload to unstable - - - - - 3 changed files: - debian/changelog - + debian/patches/fix_arm_build.patch - debian/patches/series Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,9 @@ +centrifuge (1.0.3-7) unstable; urgency=medium + + * Fix code to build on arm64 + + -- Andreas Tille <[email protected]> Sat, 07 Nov 2020 20:13:11 +0100 + centrifuge (1.0.3-6) unstable; urgency=medium * Fix patch for other architectures than amd64 ===================================== debian/patches/fix_arm_build.patch ===================================== @@ -0,0 +1,26 @@ +Description: Char needs to be declared signed if negative values are assigned +Author: Andreas Tille <[email protected]> +Last-Update: Fri, 06 Nov 2020 16:51:21 +0100 + +--- a/alphabet.cpp ++++ b/alphabet.cpp +@@ -400,7 +400,7 @@ int dnacomp[5] = { + + const char *iupacs = "!ACMGRSVTWYHKDBN!acmgrsvtwyhkdbn"; + +-char mask2iupac[16] = { ++signed char mask2iupac[16] = { + -1, + 'A', // 0001 + 'C', // 0010 +--- a/alphabet.h ++++ b/alphabet.h +@@ -65,7 +65,7 @@ extern uint8_t dinuc2color[5][5]; + /// corresponding 2-bit nucleotide + extern uint8_t nuccol2nuc[5][5]; + /// Convert a 4-bit mask into an IUPAC code +-extern char mask2iupac[16]; ++extern signed char mask2iupac[16]; + + /// Convert an ascii color to an ascii dna char + extern char col2dna[]; ===================================== debian/patches/series ===================================== @@ -5,3 +5,4 @@ hardening.patch no_msse2.patch 2to3.patch enable_arm64_and_others.patch +fix_arm_build.patch View it on GitLab: https://salsa.debian.org/med-team/centrifuge/-/compare/a80bc8c7792c0a0536f22a197f257c34ded5775c...43c60e3eb750080b8d260ffdd08d676a25fe171f -- View it on GitLab: https://salsa.debian.org/med-team/centrifuge/-/compare/a80bc8c7792c0a0536f22a197f257c34ded5775c...43c60e3eb750080b8d260ffdd08d676a25fe171f You're receiving this email because of your account on salsa.debian.org.
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