Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
17237312 by Andreas Tille at 2020-11-23T13:51:40+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,37 +1,36 @@
-Last-Update: Mon, 23 Nov 2020 01:42:03 +0000
+Last-Update: Mon, 23 Nov 2020 13:42:04 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 178 | {imaging,covid-19}
|
- orthanc | 94 | {covid-19,imaging,practice}
|
- orthanc-wsi | 48 |
{oncology,practice,his,laboratory,covid-19,imaging} |
- gdcm | 32 | {imaging-dev}
|
+ dcmtk | 181 | {imaging,covid-19}
|
+ orthanc | 97 | {covid-19,imaging,practice}
|
+ orthanc-wsi | 49 |
{oncology,practice,his,laboratory,covid-19,imaging} |
+ gdcm | 34 | {imaging-dev}
|
htsjdk | 27 | {bio-dev}
|
- dcm2niix | 22 | {imaging}
|
- dicom3tools | 22 | {imaging}
|
dicomscope | 22 | {imaging}
|
- gdcm | 20 | {imaging,covid-19}
|
- gnumed-server | 17 | {covid-19,practice}
|
- gdcm | 16 | {imaging-dev}
|
- invesalius | 13 | {imaging}
|
- minc-tools | 13 | {imaging}
|
+ dcm2niix | 21 | {imaging}
|
+ dicom3tools | 21 | {imaging}
|
+ gdcm | 19 | {imaging,covid-19}
|
+ gnumed-server | 18 | {covid-19,practice}
|
+ gdcm | 14 | {imaging-dev}
|
ngs-sdk | 13 | {bio-dev}
|
- nifticlib | 13 | {imaging}
|
- ngs-sdk | 12 | {bio-dev}
|
+ invesalius | 12 | {imaging}
|
+ minc-tools | 12 | {imaging}
|
nifticlib | 12 | {imaging-dev}
|
- openslide | 12 | {imaging}
|
+ nifticlib | 12 | {imaging}
|
adun.app | 11 | {bio}
|
- pixelmed | 11 | {imaging}
|
- plastimatch | 11 | {imaging}
|
- vtk-dicom | 11 | {imaging}
|
- biosig | 10 | {imaging,physics}
|
- insighttoolkit4 | 10 | {imaging-dev}
|
- king | 10 | {typesetting,imaging}
|
- ngs-sdk | 9 | {bio-dev}
|
+ openslide | 11 | {imaging}
|
+ pixelmed | 10 | {imaging}
|
+ plastimatch | 10 | {imaging}
|
+ vtk-dicom | 10 | {imaging}
|
+ biosig | 9 | {imaging,physics}
|
+ insighttoolkit4 | 9 | {imaging-dev}
|
+ king | 9 | {typesetting,imaging}
|
+ ngs-sdk | 8 | {bio-dev}
|
+ obitools | 8 | {bio}
|
orthanc-webviewer | 8 | {imaging}
|
- dicompyler | 7 | {oncology}
|
- obitools | 7 | {bio}
|
- pymia | 7 | {imaging-dev}
|
+ pymia | 8 | {imaging-dev}
|
+ dicompyler | 6 | {oncology}
|
ea-utils | 6 | {bio}
|
melting | 6 | {cloud,bio}
|
multiqc | 6 | {bio,covid-19}
|
@@ -42,21 +41,22 @@ Last-Update: Mon, 23 Nov 2020 01:42:03 +0000
elastix | 5 | {imaging}
|
getdata | 5 | {bio}
|
jebl2 | 5 | {bio-dev}
|
+ libminc | 5 | {imaging-dev}
|
librg-utils-perl | 5 | {bio}
|
- libsbml | 5 | {bio-dev}
|
+ mrs | 5 | {bio}
|
orthanc-dicomweb | 5 | {imaging,covid-19}
|
+ rambo-k | 5 | {bio}
|
biomaj3-cli | 4 | {cloud}
|
emboss-explorer | 4 | {bio}
|
- libminc | 4 | {imaging-dev}
|
+ libsbml | 4 | {bio-dev}
|
mipe | 4 | {cloud,bio}
|
- mrs | 4 | {bio}
|
orthanc-mysql | 4 | {imaging}
|
orthanc-postgresql | 4 | {imaging}
|
paraclu | 4 | {cloud,bio}
|
phyutility | 4 | {cloud,bio}
|
- rambo-k | 4 | {bio}
|
spread-phy | 4 | {bio-phylogeny,bio}
|
staden | 4 | {bio}
|
+ tracetuner | 4 | {bio}
|
anfo | 3 | {bio,cloud}
|
arden | 3 | {bio,cloud}
|
assemblytics | 3 | {bio}
|
@@ -88,14 +88,11 @@ Last-Update: Mon, 23 Nov 2020 01:42:03 +0000
sibsim4 | 3 | {cloud,bio}
|
spaced | 3 | {bio}
|
stacks | 3 | {bio}
|
- tracetuner | 3 | {bio}
|
- zalign | 3 | {cloud,bio}
|
atropos | 2 | {bio}
|
biosig | 2 | {imaging-dev,physics}
|
brig | 2 | {bio}
|
busco | 2 | {covid-19,bio}
|
canu | 2 | {bio}
|
- ctn | 2 | {imaging-dev}
|
dindel | 2 | {bio}
|
ecopcr | 2 | {bio}
|
embassy-domsearch | 2 | {cloud,bio}
|
@@ -133,16 +130,17 @@ Last-Update: Mon, 23 Nov 2020 01:42:03 +0000
soapaligner | 2 | {bio}
|
soapsnp | 2 | {bio}
|
sprai | 2 | {bio}
|
- srf | 2 | {bio-dev}
|
suitename | 2 | {bio}
|
surankco | 2 | {bio}
|
yaha | 2 | {bio}
|
+ zalign | 2 | {cloud,bio}
|
bambamc | 1 | {bio-dev}
|
bbmap | 1 | {covid-19,bio}
|
biosig | 1 | {physics,imaging-dev}
|
blasr | 1 | {bio-ngs,bio}
|
blimps | 1 | {bio}
|
cat-bat | 1 | {covid-19,bio}
|
+ ctn | 1 | {imaging-dev}
|
delly | 1 | {covid-19,bio}
|
emmax | 1 | {bio}
|
gatb-core | 1 | {bio}
|
@@ -180,6 +178,7 @@ Last-Update: Mon, 23 Nov 2020 01:42:03 +0000
sift | 1 | {bio}
|
simpleitk | 1 | {imaging-dev}
|
simrisc | 1 | {oncology}
|
+ srf | 1 | {bio-dev}
|
thesias | 1 | {covid-19,bio}
|
trace2dbest | 1 | {bio}
|
tvc | 1 | {bio}
|
@@ -220,8 +219,8 @@ Last-Update: Mon, 23 Nov 2020 01:42:03 +0000
pique | 0 | {bio}
|
plasmidid | 0 | {bio,covid-19}
|
pplacer | 0 | {bio,bio-phylogeny,covid-19}
|
- python-seqcluster | 0 | {bio}
|
python-seqcluster | 0 | {covid-19,bio-dev}
|
+ python-seqcluster | 0 | {bio}
|
q2templates | 0 | {bio}
|
sambamba | 0 | {bio}
|
sbmltoolbox | 0 | {bio-dev}
|
@@ -239,5 +238,5 @@ Last-Update: Mon, 23 Nov 2020 01:42:03 +0000
mssstest | -1 | {tools}
|
orthanc-python | -1 | {covid-19}
|
svim | -1 | {bio}
|
-(267 rows)
+(266 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/172373126eb87ef48e9502e0d6916f1bba69db03
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/172373126eb87ef48e9502e0d6916f1bba69db03
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