Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
0d7916be by Andreas Tille at 2021-03-02T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,36 +1,36 @@
-Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
+Last-Update: Tue, 02 Mar 2021 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 188 | {imaging,covid-19}
|
- orthanc | 97 | {covid-19,imaging,practice}
|
- orthanc-wsi | 48 |
{imaging,covid-19,laboratory,his,oncology,practice} |
+ dcmtk | 186 | {imaging,covid-19}
|
+ orthanc | 96 | {covid-19,imaging,practice}
|
+ orthanc-wsi | 49 |
{imaging,covid-19,laboratory,his,oncology,practice} |
gdcm | 46 | {imaging-dev}
|
- amide | 43 | {imaging}
|
+ amide | 40 | {imaging}
|
dicom3tools | 38 | {imaging}
|
dicomscope | 31 | {imaging}
|
+ dcm2niix | 24 | {imaging}
|
htsjdk | 24 | {bio-dev}
|
- dcm2niix | 23 | {imaging}
|
- nifticlib | 23 | {imaging}
|
+ nifticlib | 24 | {imaging}
|
dicomnifti | 22 | {imaging}
|
- minc-tools | 20 | {imaging}
|
+ minc-tools | 21 | {imaging}
|
+ gdcm | 20 | {covid-19,imaging}
|
odin | 20 | {imaging,imaging-dev}
|
- gdcm | 19 | {covid-19,imaging}
|
- plastimatch | 16 | {imaging}
|
+ plastimatch | 17 | {imaging}
|
+ invesalius | 16 | {imaging}
|
+ vtk-dicom | 16 | {imaging}
|
gnumed-server | 15 | {covid-19,practice}
|
- invesalius | 15 | {imaging}
|
- vtk-dicom | 15 | {imaging}
|
- mia | 13 | {imaging}
|
- pixelmed | 13 | {imaging}
|
- gdcm | 12 | {imaging-dev}
|
- ngs-sdk | 12 | {bio-dev}
|
- openslide | 12 | {imaging}
|
+ mia | 14 | {imaging}
|
+ pixelmed | 14 | {imaging}
|
+ gdcm | 13 | {imaging-dev}
|
+ ngs-sdk | 13 | {bio-dev}
|
+ openslide | 13 | {imaging}
|
+ nifti2dicom | 12 | {imaging}
|
adun.app | 11 | {bio}
|
+ king | 11 | {typesetting,imaging}
|
nifti2dicom | 11 | {imaging}
|
insighttoolkit4 | 10 | {imaging-dev}
|
jebl2 | 10 | {bio-dev}
|
- king | 10 | {typesetting,imaging}
|
- nifti2dicom | 10 | {imaging}
|
orthanc-webviewer | 10 | {imaging}
|
biojava-live | 9 | {bio-dev}
|
jellyfish1 | 9 | {bio}
|
@@ -52,11 +52,13 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
stacks | 7 | {bio}
|
treeview | 7 | {bio-phylogeny,bio}
|
arden | 6 | {bio,cloud}
|
+ bart-view | 6 | {imaging}
|
clonalorigin | 6 | {bio}
|
elastix | 6 | {imaging}
|
embassy-domalign | 6 | {cloud,bio}
|
embassy-domsearch | 6 | {bio,cloud}
|
lamarc | 6 | {bio}
|
+ libpal-java | 6 | {bio-dev}
|
librg-utils-perl | 6 | {bio}
|
libsbml | 6 | {bio-dev}
|
mauve-aligner | 6 | {bio}
|
@@ -70,8 +72,8 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
sibsim4 | 6 | {bio,cloud}
|
soapsnp | 6 | {bio}
|
spread-phy | 6 | {bio,bio-phylogeny}
|
+ staden | 6 | {bio}
|
assemblytics | 5 | {bio}
|
- bart-view | 5 | {imaging}
|
brig | 5 | {bio}
|
canu | 5 | {bio}
|
clonalframeml | 5 | {bio,covid-19}
|
@@ -82,7 +84,6 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
ipig | 5 | {bio}
|
jmodeltest | 5 | {bio-phylogeny,bio}
|
libminc | 5 | {imaging-dev}
|
- libpal-java | 5 | {bio-dev}
|
openslide | 5 | {imaging-dev}
|
paraclu | 5 | {cloud,bio}
|
proalign | 5 | {bio,bio-phylogeny}
|
@@ -95,7 +96,6 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
samblaster | 5 | {bio,covid-19}
|
seqsero | 5 | {bio}
|
soapaligner | 5 | {bio}
|
- staden | 5 | {bio}
|
surankco | 5 | {bio}
|
tracetuner | 5 | {bio}
|
tvc | 5 | {bio}
|
@@ -149,12 +149,14 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
bbmap | 1 | {bio,covid-19}
|
bustools | 1 | {covid-19,bio}
|
ctn | 1 | {imaging-dev}
|
+ eegdev | 1 | {imaging-dev}
|
emboss-explorer | 1 | {bio}
|
emmax | 1 | {bio}
|
libctapimkt | 1 | {practice}
|
libmuscle | 1 | {bio-dev}
|
libvistaio | 1 | {imaging-dev}
|
ncbi-vdb | 1 | {bio-dev}
|
+ opencfu | 1 | {laboratory}
|
opensurgsim | 1 | {imaging-dev}
|
orthanc-gdcm | 1 | {imaging}
|
papyrus | 1 | {imaging-dev}
|
@@ -173,6 +175,7 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
thesias | 1 | {covid-19,bio}
|
tophat-recondition | 1 | {bio,covid-19}
|
varna | 1 | {bio}
|
+ vtk-dicom | 1 | {imaging-dev}
|
yanagiba | 1 | {covid-19,bio}
|
bambamc | 0 | {bio-dev}
|
biojava4-live | 0 | {bio-dev}
|
@@ -180,7 +183,6 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
bmtk | 0 | {psychology}
|
camp | 0 | {imaging-dev}
|
dextractor | 0 | {bio,covid-19}
|
- eegdev | 0 | {imaging-dev}
|
fis-gtm | 0 | {his}
|
gatb-core | 0 | {bio-dev}
|
htscodecs | 0 | {bio-dev,covid-19}
|
@@ -219,13 +221,12 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
milib | 0 | {bio-dev,covid-19}
|
mssstest | 0 | {tools}
|
nifticlib | 0 | {imaging-dev}
|
- opencfu | 0 | {laboratory}
|
orthanc-imagej | 0 | {imaging}
|
pbcopper | 0 | {bio-dev}
|
pbseqlib | 0 | {bio-dev}
|
plasmidid | 0 | {covid-19,bio}
|
- python-seqcluster | 0 | {covid-19,bio-dev}
|
python-seqcluster | 0 | {bio}
|
+ python-seqcluster | 0 | {covid-19,bio-dev}
|
q2-sample-classifier | 0 | {bio,bio-dev}
|
resfinder-db | 0 | {bio}
|
sbmltoolbox | 0 | {bio-dev}
|
@@ -234,7 +235,6 @@ Last-Update: Tue, 02 Mar 2021 01:42:03 +0000
simpleitk | 0 | {imaging-dev}
|
smrtanalysis | 0 | {covid-19,bio}
|
vienna-rna | 0 | {bio,covid-19}
|
- vtk-dicom | 0 | {imaging-dev}
|
xdffileio | 0 | {imaging-dev}
|
orthanc-python | -1 | {covid-19}
|
(267 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0d7916be05ed656e4bc4f32af179c7eb80b0067a
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0d7916be05ed656e4bc4f32af179c7eb80b0067a
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