Andreas Tille pushed to branch master at Debian Med / python-scanpy
Commits: 4784bbf6 by Andreas Tille at 2021-03-24T11:57:40+01:00 python3-igraph is used in tests (maybe it needs to be added manually to Recommends or Suggests) - - - - - 04ec2cbd by Andreas Tille at 2021-03-24T11:57:40+01:00 Rename to python-scanpy - - - - - 14a428e8 by Andreas Tille at 2021-03-24T11:57:40+01:00 Include data file to run test suite - - - - - 0196b530 by Andreas Tille at 2021-03-24T11:57:40+01:00 New upstream version 1.7.1 - - - - - 6 changed files: - debian/changelog - debian/control - + debian/data/get - + debian/data/pbmc3k_raw.h5ad - debian/rules - + debian/source/include-binaries Changes: ===================================== debian/changelog ===================================== @@ -1,4 +1,4 @@ -scanpy (1.7.1-1) UNRELEASED; urgency=medium +python-scanpy (1.7.1-1) UNRELEASED; urgency=medium * Team upload * Initial release (Closes: #970887) ===================================== debian/control ===================================== @@ -1,4 +1,4 @@ -Source: scanpy +Source: python-scanpy Section: science Priority: optional Maintainer: Debian Med Packaging Team <[email protected]> @@ -32,11 +32,13 @@ Build-Depends: debhelper-compat (= 13), python3-legacy-api-wrap, python3-pytoml, python3-pytest <!nocheck>, - python3-pytest-cov <!nocheck> + python3-pytest-cov <!nocheck>, + python3-igraph <!nocheck>, + python3-leidenalg <!nocheck> Standards-Version: 4.5.1 Homepage: https://github.com/theislab/scanpy -Vcs-Browser: https://salsa.debian.org/med-team/scanpy -Vcs-Git: https://salsa.debian.org/med-team/scanpy.git +Vcs-Browser: https://salsa.debian.org/med-team/python-scanpy +Vcs-Git: https://salsa.debian.org/med-team/python-scanpy.git Testsuite: autopkgtest-pkg-python Rules-Requires-Root: no ===================================== debian/data/get ===================================== @@ -0,0 +1,2 @@ +#!/bin/sh +wget -q http://falexwolf.de/data/pbmc3k_raw.h5ad ===================================== debian/data/pbmc3k_raw.h5ad ===================================== Binary files /dev/null and b/debian/data/pbmc3k_raw.h5ad differ ===================================== debian/rules ===================================== @@ -16,6 +16,7 @@ override_dh_auto_clean: ${RM} -rf .pybuild __pycache__ scanpy/tests/__pycache__ scanpy/__pycache__ override_dh_auto_test: + cp -a debian/data data PYBUILD_SYSTEM=custom \ PYBUILD_TEST_ARGS="pytest-3 -rx --ignore=scanpy/tests/_images -cov=scanpy --cov=tests --cov=docs_src --cov-report=term-missing:skip-covered -o console_output_style=progress" \ dh_auto_test ===================================== debian/source/include-binaries ===================================== @@ -0,0 +1 @@ +debian/data/pbmc3k_raw.h5ad View it on GitLab: https://salsa.debian.org/med-team/python-scanpy/-/compare/78277c0c77258cedb6625159702603e0d3b5f6be...0196b530892c3cebb7c492b57153a70658e51a93 -- View it on GitLab: https://salsa.debian.org/med-team/python-scanpy/-/compare/78277c0c77258cedb6625159702603e0d3b5f6be...0196b530892c3cebb7c492b57153a70658e51a93 You're receiving this email because of your account on salsa.debian.org.
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