Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
de5d4a7e by Andreas Tille at 2021-03-28T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,55 +1,56 @@
-Last-Update: Sun, 28 Mar 2021 01:42:03 +0000
+Last-Update: Sun, 28 Mar 2021 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 205 | {imaging,covid-19}
|
+ dcmtk | 207 | {imaging,covid-19}
|
orthanc | 97 | {covid-19,practice,imaging}
|
orthanc-wsi | 49 |
{his,oncology,covid-19,imaging,practice,laboratory} |
- gdcm | 36 | {imaging-dev}
|
- amide | 34 | {imaging}
|
- dicom3tools | 32 | {imaging}
|
- dicomscope | 29 | {imaging}
|
- openslide | 29 | {imaging}
|
- gdcm | 20 | {imaging,covid-19}
|
- htsjdk | 20 | {bio-dev}
|
- odin | 19 | {imaging,imaging-dev}
|
- nifticlib | 18 | {imaging}
|
+ gdcm | 38 | {imaging-dev}
|
+ amide | 35 | {imaging}
|
+ dicom3tools | 31 | {imaging}
|
+ dicomscope | 28 | {imaging}
|
+ openslide | 28 | {imaging}
|
+ htsjdk | 21 | {bio-dev}
|
+ odin | 20 | {imaging,imaging-dev}
|
+ gdcm | 18 | {imaging,covid-19}
|
dcm2niix | 17 | {imaging}
|
- gnumed-server | 17 | {covid-19,practice}
|
+ nifticlib | 17 | {imaging}
|
dicomnifti | 16 | {imaging}
|
- invesalius | 16 | {imaging}
|
+ gnumed-server | 16 | {covid-19,practice}
|
gdcm | 15 | {imaging-dev}
|
+ invesalius | 15 | {imaging}
|
minc-tools | 14 | {imaging}
|
pixelmed | 14 | {imaging}
|
vtk-dicom | 14 | {imaging}
|
insighttoolkit4 | 12 | {imaging-dev}
|
- adun.app | 11 | {bio}
|
- nifti2dicom | 11 | {imaging}
|
- plastimatch | 11 | {imaging}
|
+ adun.app | 10 | {bio}
|
mia | 10 | {imaging}
|
ngs-sdk | 10 | {bio-dev}
|
nifti2dicom | 10 | {imaging}
|
orthanc-webviewer | 10 | {imaging}
|
+ plastimatch | 10 | {imaging}
|
+ nifti2dicom | 9 | {imaging}
|
+ bamkit | 8 | {covid-19,bio}
|
ngs-sdk | 8 | {bio-dev}
|
- bamkit | 7 | {covid-19,bio}
|
+ king | 7 | {imaging,typesetting}
|
melting | 7 | {bio,cloud}
|
- cufflinks | 6 | {cloud,bio}
|
- king | 6 | {imaging,typesetting}
|
libminc | 6 | {imaging-dev}
|
obitools | 6 | {bio}
|
- salmon | 6 | {covid-19,bio}
|
dicompyler | 5 | {oncology}
|
- ea-utils | 5 | {bio}
|
librg-utils-perl | 5 | {bio}
|
openslide | 5 | {imaging-dev}
|
rambo-k | 5 | {bio}
|
salmid | 5 | {bio}
|
+ salmon | 5 | {covid-19,bio}
|
treeview | 5 | {bio-phylogeny,bio}
|
bart-view | 4 | {imaging}
|
busco | 4 | {bio,covid-19}
|
+ cufflinks | 4 | {cloud,bio}
|
+ ea-utils | 4 | {bio}
|
elastix | 4 | {imaging}
|
jebl2 | 4 | {bio-dev}
|
lagan | 4 | {bio}
|
+ ngs-sdk | 4 | {bio-dev}
|
orthanc-dicomweb | 4 | {covid-19,imaging}
|
pymia | 4 | {imaging-dev}
|
beast-mcmc | 3 | {bio-phylogeny,bio}
|
@@ -64,18 +65,17 @@ Last-Update: Sun, 28 Mar 2021 01:42:03 +0000
lamarc | 3 | {bio}
|
libdivsufsort | 3 | {bio-dev}
|
microbegps | 3 | {bio}
|
- ngs-sdk | 3 | {bio-dev}
|
nifticlib | 3 | {imaging-dev}
|
orthanc-postgresql | 3 | {imaging}
|
oscar | 3 | {tools,practice,data}
|
pbdagcon | 3 | {bio}
|
phyutility | 3 | {bio,cloud}
|
piler | 3 | {bio}
|
+ plasmidid | 3 | {bio,covid-19}
|
rdp-alignment | 3 | {bio}
|
runcircos-gui | 3 | {bio}
|
saint | 3 | {bio}
|
sibsim4 | 3 | {cloud,bio}
|
- sight | 3 | {imaging}
|
spread-phy | 3 | {bio-phylogeny,bio}
|
stacks | 3 | {bio}
|
suitename | 3 | {bio}
|
@@ -113,7 +113,6 @@ Last-Update: Sun, 28 Mar 2021 01:42:03 +0000
perm | 2 | {cloud,bio}
|
phast | 2 | {bio}
|
placnet | 2 | {bio}
|
- plasmidid | 2 | {bio,covid-19}
|
plasmidseeker | 2 | {bio}
|
prime-phylo | 2 | {cloud,bio}
|
proalign | 2 | {bio-phylogeny,bio}
|
@@ -128,6 +127,7 @@ Last-Update: Sun, 28 Mar 2021 01:42:03 +0000
seq-gen | 2 | {bio}
|
sga | 2 | {bio}
|
sift | 2 | {bio}
|
+ sight | 2 | {imaging}
|
soapaligner | 2 | {bio}
|
soapsnp | 2 | {bio}
|
spaced | 2 | {bio}
|
@@ -222,8 +222,8 @@ Last-Update: Sun, 28 Mar 2021 01:42:03 +0000
parallel-fastq-dump | 0 | {covid-19}
|
pbcopper | 0 | {bio-dev}
|
pbseqlib | 0 | {bio-dev}
|
- python-seqcluster | 0 | {covid-19,bio-dev}
|
python-seqcluster | 0 | {bio}
|
+ python-seqcluster | 0 | {covid-19,bio-dev}
|
q2-sample-classifier | 0 | {bio,bio-dev}
|
resfinder-db | 0 | {bio}
|
sbmltoolbox | 0 | {bio-dev}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/de5d4a7e97a7ba49ea79a73287d42d2f3a389e50
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/de5d4a7e97a7ba49ea79a73287d42d2f3a389e50
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