Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
a861a030 by Andreas Tille at 2021-04-13T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,57 +1,57 @@
-Last-Update: Tue, 13 Apr 2021 01:42:04 +0000
+Last-Update: Tue, 13 Apr 2021 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 201 | {covid-19,imaging}
|
- orthanc | 95 | {covid-19,practice,imaging}
|
- orthanc-wsi | 46 |
{laboratory,imaging,his,oncology,covid-19,practice} |
- gdcm | 40 | {imaging-dev}
|
- amide | 36 | {imaging}
|
+ dcmtk | 200 | {covid-19,imaging}
|
+ orthanc | 96 | {covid-19,practice,imaging}
|
+ orthanc-wsi | 47 |
{laboratory,imaging,his,oncology,covid-19,practice} |
+ gdcm | 43 | {imaging-dev}
|
+ openslide | 40 | {imaging}
|
+ amide | 37 | {imaging}
|
dicom3tools | 33 | {imaging}
|
nipype | 30 | {imaging,imaging-dev}
|
- openslide | 27 | {imaging}
|
- dcm2niix | 25 | {imaging}
|
- dicomscope | 24 | {imaging}
|
+ dcm2niix | 27 | {imaging}
|
+ dicomscope | 25 | {imaging}
|
+ htsjdk | 22 | {bio-dev}
|
gdcm | 21 | {covid-19,imaging}
|
- htsjdk | 21 | {bio-dev}
|
- odin | 20 | {imaging-dev,imaging}
|
- nifticlib | 18 | {imaging}
|
+ odin | 21 | {imaging-dev,imaging}
|
+ nifticlib | 19 | {imaging}
|
+ minc-tools | 18 | {imaging}
|
gdcm | 17 | {imaging-dev}
|
- minc-tools | 17 | {imaging}
|
+ pixelmed | 16 | {imaging}
|
+ dicomnifti | 15 | {imaging}
|
gnumed-server | 15 | {practice,covid-19}
|
- pixelmed | 15 | {imaging}
|
- dicomnifti | 14 | {imaging}
|
- vtk-dicom | 14 | {imaging}
|
- invesalius | 13 | {imaging}
|
- mia | 13 | {imaging}
|
+ vtk-dicom | 15 | {imaging}
|
+ invesalius | 14 | {imaging}
|
+ mia | 14 | {imaging}
|
orthanc-webviewer | 12 | {imaging}
|
- plastimatch | 11 | {imaging}
|
+ plastimatch | 12 | {imaging}
|
adun.app | 10 | {bio}
|
insighttoolkit4 | 10 | {imaging-dev}
|
nifti2dicom | 10 | {imaging}
|
- ngs-sdk | 9 | {bio-dev}
|
+ king | 8 | {imaging,typesetting}
|
ngs-sdk | 8 | {bio-dev}
|
nifti2dicom | 8 | {imaging}
|
- king | 7 | {imaging,typesetting}
|
melting | 7 | {cloud,bio}
|
+ salmid | 7 | {bio}
|
treeview | 7 | {bio,bio-phylogeny}
|
bamkit | 6 | {covid-19,bio}
|
biomaj3-cli | 6 | {cloud}
|
ea-utils | 6 | {bio}
|
lagan | 6 | {bio}
|
- salmid | 6 | {bio}
|
+ libminc | 6 | {imaging-dev}
|
+ busco | 5 | {covid-19,bio}
|
dicompyler | 5 | {oncology}
|
jebl2 | 5 | {bio-dev}
|
- libminc | 5 | {imaging-dev}
|
ngs-sdk | 5 | {bio-dev}
|
obitools | 5 | {bio}
|
openslide | 5 | {imaging-dev}
|
bart-view | 4 | {imaging}
|
bitseq | 4 | {bio}
|
- busco | 4 | {covid-19,bio}
|
lamarc | 4 | {bio}
|
libncl | 4 | {bio}
|
librg-utils-perl | 4 | {bio}
|
+ nifticlib | 4 | {imaging-dev}
|
orthanc-dicomweb | 4 | {covid-19,imaging}
|
orthanc-mysql | 4 | {imaging}
|
phast | 4 | {bio}
|
@@ -68,7 +68,6 @@ Last-Update: Tue, 13 Apr 2021 01:42:04 +0000
getdata | 3 | {bio}
|
ghmm | 3 | {bio}
|
libdivsufsort | 3 | {bio-dev}
|
- nifticlib | 3 | {imaging-dev}
|
orthanc-postgresql | 3 | {imaging}
|
plasmidid | 3 | {covid-19,bio}
|
rambo-k | 3 | {bio}
|
@@ -77,6 +76,7 @@ Last-Update: Tue, 13 Apr 2021 01:42:04 +0000
anfo | 2 | {bio,cloud}
|
arden | 2 | {cloud,bio}
|
assemblytics | 2 | {bio}
|
+ bbmap | 2 | {covid-19,bio}
|
blimps | 2 | {bio}
|
cat-bat | 2 | {covid-19,bio}
|
clonalorigin | 2 | {bio}
|
@@ -114,7 +114,6 @@ Last-Update: Tue, 13 Apr 2021 01:42:04 +0000
zalign | 2 | {bio,cloud}
|
acedb | 1 | {bio,cloud}
|
atropos | 1 | {bio}
|
- bbmap | 1 | {covid-19,bio}
|
brig | 1 | {bio}
|
bustools | 1 | {covid-19,bio}
|
canu | 1 | {bio}
|
@@ -158,6 +157,7 @@ Last-Update: Tue, 13 Apr 2021 01:42:04 +0000
sga | 1 | {bio}
|
shovill | 1 | {bio,covid-19}
|
simpleitk | 1 | {imaging-dev}
|
+ simrisc | 1 | {oncology}
|
skesa | 1 | {bio}
|
skewer | 1 | {bio}
|
soapsnp | 1 | {bio}
|
@@ -224,14 +224,13 @@ Last-Update: Tue, 13 Apr 2021 01:42:04 +0000
pbcopper | 0 | {bio-dev}
|
pbseqlib | 0 | {bio-dev}
|
python-epimodels | 0 | {epi}
|
- python-seqcluster | 0 | {bio-dev,covid-19}
|
python-seqcluster | 0 | {bio}
|
+ python-seqcluster | 0 | {bio-dev,covid-19}
|
q2-sample-classifier | 0 | {bio-dev,bio}
|
resfinder-db | 0 | {bio}
|
sbmltoolbox | 0 | {bio-dev}
|
seq-gen | 0 | {bio}
|
simpleitk | 0 | {imaging-dev}
|
- simrisc | 0 | {oncology}
|
smrtanalysis | 0 | {bio,covid-19}
|
srf | 0 | {bio-dev}
|
varna | 0 | {bio}
|
@@ -240,5 +239,5 @@ Last-Update: Tue, 13 Apr 2021 01:42:04 +0000
mssstest | -1 | {tools}
|
orthanc-python | -1 | {covid-19}
|
sight | -1 | {imaging-dev}
|
-(270 rows)
+(269 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/a861a03068c147e53a67c1a00de07d0ffab46d71
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/a861a03068c147e53a67c1a00de07d0ffab46d71
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