Le Thu, Oct 15, 2009 at 01:58:15PM +0200, Andreas Tille a écrit : > Jar-jungle
Hi Andreas, I had a look at Artemis. First (and unrelated to jEmboss), I found a copy of Picard, which in my opinion would desserve an ITP anyway: http://picard.sourceforge.net I am not sure if I am competent to package java programs yet, but I definitely will try to help you if you start the package. Then I looked at jemAlign. Indeed it contains EMBOSS files. resources.jar contains BLOSUM martices. You can depend on emboss-data to get them in /usr/share/EMBOSS/data. Other files are in jEmboss, but not as a jar file, for instance: $ apt-file search JembossJarUtil.class jemboss: /usr/share/EMBOSS/jemboss/org/emboss/jemboss/JembossJarUtil.class Maybe the simplest is to ask Upstream if the whole jemAlign.jar file can be bypassed if jEmboss is installed. Good luck and beware of tigers, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
