Hi Shayan and Andreas, There seems to be a problem with gatb-core's cmake file (/usr/lib/<arch>/cmake/GatbCore.cmake), and the same persists also in minia (I couldn't built that from source too). As none of these packages need to build gatb-core from source, the line 'include (GatbCore)' can be safely removed from CMakeLists.txt. I did this for minia, and it worked. For mindthegap I managed to get to linking, but something else failed, nonetheless, library of gatb-core seems to be loaded successfully.
I'll try to fix minia. Best wishes, Andrius On 2019-07-03 22:52, [email protected] wrote: > Patching seemed to be successful because running pbuilder states that it has > applied the patch that I made. VERBOSE is uncommented and equals 1 in the > rules, and that's the log that I can get above. Is there anyway to get a more > meaningful output? Maybe I am using pbuilder wrong, but I have my doubts as > libgatbcore-dev is installed successfully within the pbuilder session. The > CMakeFile mainly reflects what you did for minia, so I don't see why this > would be a problem unless I am acting stupid and have missed out something > obvious. I'm not sure as to what other information I can provide on top of > this. -- Andrius Merkys Vilnius University Institute of Biotechnology, Saulėtekio al. 7, room V325 LT-10257 Vilnius, Lithuania
