https://github.com/Intel-HLS/GKL A Java wrapper around an Intel optimized implementations of PairHMM, Smith-Waterman, and DEFLATE.
Uses SIMD intrinsics and assembly. At https://salsa.debian.org/misterc-guest/gkl/tree/experimental/simde is a fork using the SIMD Everywhere library, but I lack the expertise to produce source versions of the many assembler only routines. Any suggestions / contributions? -- Michael R. Crusoe
