Hi, I'd like to package the latest version of phyml[1]. Unfortunately I get
... gcc -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -std=c99 -O2 -fomit-frame-pointer -funroll-loops -Wall -Winline -march=native -I/usr/include/libhmsbeagle-1 -lhmsbeagle -ldl -c -o lk.o lk.c utilities.c: In function 'K80_dist': utilities.c:2108:7: warning: unused variable 'temp' [-Wunused-variable] int temp; ^~~~ lk.c: In function 'Lk': lk.c:435:22: warning: unused variable 'npatterns' [-Wunused-variable] const unsigned int npatterns = tree->n_pattern; ^~~~~~~~~ lk.c:434:22: warning: unused variable 'ncatg' [-Wunused-variable] const unsigned int ncatg = tree->mod->ras->n_catg; ^~~~~ lk.c:433:22: warning: unused variable 'ns' [-Wunused-variable] const unsigned int ns = tree->mod->ns; ^~ lk.c:432:21: warning: variable 'dot_prod' set but not used [-Wunused-but-set-variable] phydbl len,*expl,*dot_prod; ^~~~~~~~ lk.c:432:15: warning: variable 'expl' set but not used [-Wunused-but-set-variable] phydbl len,*expl,*dot_prod; ^~~~ lk.c:432:10: warning: unused variable 'len' [-Wunused-variable] phydbl len,*expl,*dot_prod; ^~~ lk.c:431:46: warning: unused variable 'site' [-Wunused-variable] unsigned int br,catg,state,ambiguity_check,site; ^~~~ lk.c:431:30: warning: unused variable 'ambiguity_check' [-Wunused-variable] unsigned int br,catg,state,ambiguity_check,site; ^~~~~~~~~~~~~~~ lk.c:431:24: warning: unused variable 'state' [-Wunused-variable] unsigned int br,catg,state,ambiguity_check,site; ^~~~~ lk.c:431:19: warning: unused variable 'catg' [-Wunused-variable] unsigned int br,catg,state,ambiguity_check,site; ^~~~ lk.c: In function 'Update_PMat_At_Given_Edge': lk.c:2263:31: error: invalid initializer int p_matrices[1] = b_fcus->Pij_rr_idx; ^~~~~~ lk.c:2264:31: error: invalid initializer double branch_lens[1] = len; ^~~ Makefile:1682: recipe for target 'lk.o' failed make[4]: *** [lk.o] Error 1 make[4]: *** Waiting for unfinished jobs.... ... when trying to build the latest status in Git. Any hint how to solve this? Kind regards Andreas. [1] https://anonscm.debian.org/git/debian-med/phyml.git -- http://fam-tille.de