Hi, I#m facing a C++ problem with the new version of iqtree. If I build the current state in Git[1] I get:
... [ 7%] Building C object pll/CMakeFiles/pll.dir/evaluateGenericSpecial.c.o cd /build/iqtree-1.4.0+dfsg/obj-x86_64-linux-gnu/pll && /usr/bin/cc -DIQ_TREE -D_USE_PTHREADS -D__SSE3 -I/build/iqtree-1.4.0+dfsg -I/build/iqtree-1.4.0+dfsg/obj-x86_64-linux-gnu -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -pthread -o CMakeFiles/pll.dir/evaluateGenericSpecial.c.o -c /build/iqtree-1.4.0+dfsg/pll/evaluateGenericSpecial.c In file included from /build/iqtree-1.4.0+dfsg/pll/evaluateGenericSpecial.c:46:0: /build/iqtree-1.4.0+dfsg/pll/pllInternal.h:150:30: warning: inline function 'bitcount_64_bit' declared but never defined extern __inline unsigned int bitcount_64_bit(uint64_t i); ^ In file included from /build/iqtree-1.4.0+dfsg/pll/pll.h:79:0, from /build/iqtree-1.4.0+dfsg/pll/mem_alloc.h:16, from /build/iqtree-1.4.0+dfsg/pll/evaluateGenericSpecial.c:31: /build/iqtree-1.4.0+dfsg/pll/evaluateGenericSpecial.c: In function 'evaluateGTRCATPROT': /usr/lib/gcc/x86_64-linux-gnu/5/include/pmmintrin.h:86:1: error: inlining failed in call to always_inline '_mm_hadd_pd': target specific option mismatch _mm_hadd_pd (__m128d __X, __m128d __Y) ^ /build/iqtree-1.4.0+dfsg/pll/evaluateGenericSpecial.c:2667:10: error: called from here tv = _mm_hadd_pd(tv, tv); ^ In file included from /build/iqtree-1.4.0+dfsg/pll/pll.h:79:0, from /build/iqtree-1.4.0+dfsg/pll/mem_alloc.h:16, from /build/iqtree-1.4.0+dfsg/pll/evaluateGenericSpecial.c:31: /usr/lib/gcc/x86_64-linux-gnu/5/include/pmmintrin.h:86:1: error: inlining failed in call to always_inline '_mm_hadd_pd': target specific option mismatch _mm_hadd_pd (__m128d __X, __m128d __Y) ^ /build/iqtree-1.4.0+dfsg/pll/evaluateGenericSpecial.c:2700:10: error: called from here tv = _mm_hadd_pd(tv, tv); ^ pll/CMakeFiles/pll.dir/build.make:113: recipe for target 'pll/CMakeFiles/pll.dir/evaluateGenericSpecial.c.o' failed ... Any hint how to fix this? Kind regards Andreas. [1] https://anonscm.debian.org/git/debian-med/iqtree.git -- http://fam-tille.de