Hi all,

I'm experiencing some unexpected disk I/O latency on a newly built server.  
Here are some of the details:

- Supermicro motherboard with Intel PCH RAID [1]
- Debian 13.6 installed
- / is mounted on /dev/nvme0n1p2, which is an NVMe SSD, formatted with ext4
- /home is mounted on /dev/md125, which is a RAID 5 consisting of three disks, 
formatted with ext4

$ sudo mdadm -D /dev/md125
/dev/md125:
         Container : /dev/md/imsm1, member 0
        Raid Level : raid5
        Array Size : 9279152128 (8.64 TiB 9.50 TB)
     Used Dev Size : 4639576064 (4.32 TiB 4.75 TB)
      Raid Devices : 3
     Total Devices : 3

             State : active 
    Active Devices : 3
   Working Devices : 3
    Failed Devices : 0
     Spare Devices : 0

            Layout : left-asymmetric
        Chunk Size : 64K

Consistency Policy : resync


              UUID : 2fbd736b:9b750e2a:e723b80c:df2f2c33
    Number   Major   Minor   RaidDevice State
       2       8        0        0      active sync   /dev/sda
       1       8       16        1      active sync   /dev/sdb
       0       8       32        2      active sync   /dev/sdc


I'm getting some weird latency issues with fsync on the RAID disk (/home on 
/dev/md125):
(Caveat: I'm doing a file transfer that is writing to /home, so I might expect 
some latency, but nothing like this.)

$ for i in {1..5}; do time sync; done 2>&1 | grep real
real    0m21.647s
real    0m11.770s
real    0m5.234s
real    0m3.023s
real    0m0.462s

Even when I turn off the file transfer, I still get something like this:

$ for i in {1..10}; do time sync; done 2>&1 | grep real
real    0m0.147s
real    0m0.077s
real    0m0.003s
real    0m0.004s
real    0m0.003s

I've tried turning on and off smart monitoring with smartctl to see if that 
would help, and it didn't seem to help.

I'm not really sure what else I might try, and I'm reaching out to the 
community to see if anyone has any suggestions for identifying and fixing the 
problem.

Thanks,
Casey

[1] https://www.supermicro.com/manuals/other/Intel_PCH_RAID_Config.pdf

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