Hello ! > Hi Sébastien, > >>Can you post it on pastebin and link here ? > > http://pastebin.com/rXYx9heB >
There it is, the peak is at 9. 1 3911634662 2 429171406 3 274905524 4 243603494 5 226997682 6 218339456 7 215723714 *********** MinimumCoverage 8 216710436 9 217392626 *********** PeakCoverage 10 215024488 11 207784944 12 195629664 13 179308570 See image http://imgur.com/QmBUS However I am not convinced that this will produce an good assembly... I have seen better peaks in my life. ;) >>It will just reduce the number of erroneous k-mers, nothing more. > > Ok, well I'll probably retry with just 3' trimming ~10-15 bps (where the > average quality reaches 30-31, and its where most of the Ns are anyway) and > see how the distribution looks, then if it still can't find a peak I'll retry > trimming to exclude Ns. > > Walter > > Sébastien ------------------------------------------------------------------------------ 5 Ways to Improve & Secure Unified Communications Unified Communications promises greater efficiencies for business. UC can improve internal communications as well as offer faster, more efficient ways to interact with customers and streamline customer service. Learn more! http://www.accelacomm.com/jaw/sfnl/114/51426253/ _______________________________________________ Denovoassembler-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
