Messages by Date
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2017/01/31
[Denovoassembler-users] Ray Surveyor to generate kmers from assembled genomes
Taya Forde
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2016/12/04
Re: [Denovoassembler-users] Request for guidance
Sébastien Boisvert
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2016/11/15
Re: [Denovoassembler-users] Request for guidance
Pier-Luc Plante
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2016/11/15
Re: [Denovoassembler-users] Request for guidance
Jason Tan
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2016/11/15
Re: [Denovoassembler-users] Request for guidance
Jason Tan
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2016/11/15
Re: [Denovoassembler-users] Request for guidance
Sébastien Boisvert
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2016/11/15
[Denovoassembler-users] Request for guidance
Jason Tan
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2016/10/29
[Denovoassembler-users] CreateRayInputStructures.sh bug
Asker Brejnrod
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2016/06/22
Re: [Denovoassembler-users] Question about Ray Meta?
Sébastien Boisvert
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2016/04/07
Re: [Denovoassembler-users] BiologicalAbundances
marina espigares
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2016/04/05
Re: [Denovoassembler-users] BiologicalAbundances
Animesh Sharma
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2016/04/05
Re: [Denovoassembler-users] BiologicalAbundances
marina espigares
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2016/04/05
Re: [Denovoassembler-users] BiologicalAbundances
Animesh Sharma
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2016/04/05
[Denovoassembler-users] BiologicalAbundances
marina espigares
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2016/04/04
[Denovoassembler-users] Ray meta command line Inquiry
patrick student
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2015/10/21
Re: [Denovoassembler-users] Ray assembly of Hamster genome.
Tan, Yifang
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2015/10/19
[Denovoassembler-users] How to assemble pan-metagenomic
Yifan Liu
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2015/10/05
[Denovoassembler-users] Fwd: ray stops without notice?
Xabier Vázquez Campos
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2015/07/10
Re: [Denovoassembler-users] Question about "build script" for the annotation files
Boisvert, Sebastien
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2015/06/29
Re: [Denovoassembler-users] (no subject)
Hornung, Bastian
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2015/06/29
Re: [Denovoassembler-users] (no subject)
Alma Parada
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2015/06/29
Re: [Denovoassembler-users] (no subject)
Boisvert, Sebastien
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2015/06/29
[Denovoassembler-users] Question about "build script" for the annotation files
Marc P. Hoeppner
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2015/06/27
[Denovoassembler-users] (no subject)
Alma Parada
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2015/06/10
Re: [Denovoassembler-users] About Read Names in Ray Meta
Boisvert, Sebastien
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2015/05/29
Re: [Denovoassembler-users] Ray Assembler Chunk Size Error Problem
Boisvert, Sebastien
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2015/05/21
Re: [Denovoassembler-users] Ray Meta
Boisvert, Sebastien
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2015/05/19
Re: [Denovoassembler-users] long running time for metagenome assembly on Ray
Boisvert, Sebastien
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2015/05/19
Re: [Denovoassembler-users] long running time for metagenome assembly on Ray
Hornung, Bastian
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2015/05/18
[Denovoassembler-users] long running time for metagenome assembly on Ray
Rika Anderson
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2015/05/08
[Denovoassembler-users] Ray Assembler Chunk Size Error Problem
Zain A Alvi
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2015/03/30
Re: [Denovoassembler-users] Ray meta
Sébastien Boisvert
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2015/03/24
Re: [Denovoassembler-users] ray cloud browser
Xiaofen Wu
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2015/03/24
Re: [Denovoassembler-users] ray cloud browser
Sébastien Boisvert
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2015/03/24
[Denovoassembler-users] ray cloud browser
Louis Letourneau
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2015/03/09
[Denovoassembler-users] Ray meta
Xiaofen Wu
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2015/02/27
[Denovoassembler-users] RE : Ray scafolding problem
Sébastien Boisvert
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2015/02/06
[Denovoassembler-users] RE : Ray assembly of Hamster genome.
Sébastien Boisvert
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2015/01/19
Re: [Denovoassembler-users] Ray on GPU's
Boisvert, Sebastien
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2015/01/03
Re: [Denovoassembler-users] assembly w/ TruSeq synthetic reads?
Boisvert, Sebastien
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2015/01/02
[Denovoassembler-users] assembly w/ TruSeq synthetic reads?
Doyle, Jacqueline R M
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2014/12/08
Re: [Denovoassembler-users] META-Ray
Sebastien Boisvert
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2014/11/27
Re: [Denovoassembler-users] Request for Ray improvement
Boisvert, Sebastien
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2014/11/18
Re: [Denovoassembler-users] Ray (Meta)
Boisvert, Sebastien
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2014/11/18
Re: [Denovoassembler-users] Ray (Meta)
Sébastien Boisvert
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2014/11/17
Re: [Denovoassembler-users] assembly error during taxon loading
Boisvert, Sebastien
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2014/11/13
Re: [Denovoassembler-users] Ray
Boisvert, Sebastien
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2014/11/13
Re: [Denovoassembler-users] Ray
Boisvert, Sebastien
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2014/11/05
[Denovoassembler-users] assembly error during taxon loading
Deborah Triant
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2014/10/15
Re: [Denovoassembler-users] Critical exception... memory exceeds the CHUNK_SIZE
Bart Nijsse
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2014/10/14
Re: [Denovoassembler-users] Critical exception... memory exceeds the CHUNK_SIZE
Boisvert, Sebastien
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2014/10/09
[Denovoassembler-users] Critical exception... memory exceeds the CHUNK_SIZE
Bart Nijsse
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2014/10/01
Re: [Denovoassembler-users] using checkpoints
Deborah Triant
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2014/10/01
Re: [Denovoassembler-users] using checkpoints
Boisvert, Sebastien
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2014/09/30
[Denovoassembler-users] using checkpoints
Deborah Triant
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2014/09/16
Re: [Denovoassembler-users] [WG-accounts] Parallel account request rwilhelm
Boisvert, Sebastien
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2014/09/15
Re: [Denovoassembler-users] Ray assembler
Sébastien Boisvert
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2014/09/03
Re: [Denovoassembler-users] Ray for HLA analysis
Louis Letourneau
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2014/09/03
Re: [Denovoassembler-users] Ray for HLA analysis
Adrian Pelin
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2014/09/03
Re: [Denovoassembler-users] Ray for HLA analysis
Boisvert, Sebastien
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2014/08/27
Re: [Denovoassembler-users] Compiling Ray
Boisvert, Sebastien
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2014/08/27
Re: [Denovoassembler-users] RAY on Compute Canada server (Parallel)
Boisvert, Sebastien
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2014/08/26
[Denovoassembler-users] Ray for HLA analysis
Louis Letourneau
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2014/08/22
Re: [Denovoassembler-users] RAY on Compute Canada server (Parallel)
Boisvert, Sebastien
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2014/08/21
Re: [Denovoassembler-users] Ray assembler
Sébastien Boisvert
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2014/08/20
Re: [Denovoassembler-users] Version-dependent performance of Ray
Egon Ozer
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2014/08/20
Re: [Denovoassembler-users] Version-dependent performance of Ray
Boisvert, Sebastien
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2014/08/20
Re: [Denovoassembler-users] Ray Meta
Boisvert, Sebastien
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2014/08/04
[Denovoassembler-users] New assembler project: Spate
Boisvert, Sebastien
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2014/07/25
Re: [Denovoassembler-users] Assessing RayMeta on
David Alquezar
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2014/07/25
Re: [Denovoassembler-users] Information about unused reads
Hornung, Bastian
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2014/07/25
[Denovoassembler-users] Information about unused reads
Amit Bikram
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2014/07/22
Re: [Denovoassembler-users] Assessing RayMeta on
Ino de Bruijn
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2014/07/22
[Denovoassembler-users] Assessing RayMeta on
David Alquezar
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2014/07/21
Re: [Denovoassembler-users] Ray Meta Memory Usage For Large Datasets
Boisvert, Sebastien
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2014/07/07
Re: [Denovoassembler-users] Some questions about your Ray assembler
Boisvert, Sebastien
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2014/06/12
Re: [Denovoassembler-users] Help for using Ray for metagenome assembly
Sébastien Boisvert
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2014/06/04
Re: [Denovoassembler-users] Ask about Ray Meta
Sébastien Boisvert
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2014/06/03
Re: [Denovoassembler-users] Ask about Ray Meta
Sébastien Boisvert
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2014/05/21
Re: [Denovoassembler-users] technical information
Boisvert, Sebastien
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2014/05/21
Re: [Denovoassembler-users] Assembling polyploid genomes
Boisvert, Sebastien
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2014/05/21
Re: [Denovoassembler-users] Duplicate contigs?
Boisvert, Sebastien
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2014/05/18
Re: [Denovoassembler-users] Assembling polyploid genomes
Adrian Pelin
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2014/05/18
Re: [Denovoassembler-users] Duplicate contigs?
Ino de Bruijn
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2014/05/16
Re: [Denovoassembler-users] Duplicate contigs?
Ino de Bruijn
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2014/05/16
Re: [Denovoassembler-users] Duplicate contigs?
Boisvert, Sebastien
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2014/05/16
Re: [Denovoassembler-users] Duplicate contigs?
Ino de Bruijn
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2014/05/16
Re: [Denovoassembler-users] Duplicate contigs?
Boisvert, Sebastien
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2014/05/16
[Denovoassembler-users] Duplicate contigs?
Ino de Bruijn
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2014/05/15
Re: [Denovoassembler-users] problem with opening files using Ray
Boisvert, Sebastien
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2014/05/15
Re: [Denovoassembler-users] Ray -d parameter
Ino de Bruijn
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2014/05/15
Re: [Denovoassembler-users] Ray -d parameter
Boisvert, Sebastien
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2014/05/15
[Denovoassembler-users] Ray -d parameter
Ino de Bruijn
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2014/05/06
Re: [Denovoassembler-users] Info on MetaRay
Boisvert, Sebastien
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2014/05/06
Re: [Denovoassembler-users] RE : Assembler panic
Boisvert, Sebastien
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2014/04/27
Re: [Denovoassembler-users] [Trinityrnaseq-developers] other assemblers using MPI or parallelization?
Brian Haas
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2014/04/27
Re: [Denovoassembler-users] [Trinityrnaseq-developers] other assemblers using MPI or parallelization?
David Eccles (gringer)
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2014/04/22
Re: [Denovoassembler-users] Ray Run Time
Sébastien Boisvert
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2014/04/22
Re: [Denovoassembler-users] Ray Run Time
David Eccles (gringer)
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2014/04/22
Re: [Denovoassembler-users] Ray Run Time
Sébastien Boisvert
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2014/04/11
Re: [Denovoassembler-users] Info on MetaRay
Sébastien Boisvert
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2014/04/11
[Denovoassembler-users] RE : Assembler panic
Sébastien Boisvert
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2014/03/24
[Denovoassembler-users] RE : Digital Normalisation
Sébastien Boisvert
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2014/03/21
[Denovoassembler-users] Digital Normalisation
David Eccles (gringer)
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2014/03/21
[Denovoassembler-users] RE : Segmentation Fault
Sébastien Boisvert
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2014/03/20
[Denovoassembler-users] Segmentation Fault
Timothy Price
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2014/03/14
Re: [Denovoassembler-users] Ray on Redhat vs Debian
Tan, Yifang
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2014/03/14
Re: [Denovoassembler-users] Ray on Redhat vs Debian
Tan, Yifang
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2014/03/14
[Denovoassembler-users] RE : singletons
Sébastien Boisvert
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2014/03/13
Re: [Denovoassembler-users] Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
David Eccles (gringer)
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2014/03/13
[Denovoassembler-users] RE : Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
Sébastien Boisvert
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2014/03/12
[Denovoassembler-users] RE : RE : Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
Sébastien Boisvert
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2014/03/09
Re: [Denovoassembler-users] RE : Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
David Eccles (gringer)
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2014/03/07
[Denovoassembler-users] RE : Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
Sébastien Boisvert
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2014/03/01
Re: [Denovoassembler-users] Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
David Eccles (gringer)
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2014/03/01
Re: [Denovoassembler-users] Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
David Eccles (gringer)
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2014/03/01
Re: [Denovoassembler-users] Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
David Eccles (gringer)
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2014/02/28
Re: [Denovoassembler-users] Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
David Eccles (gringer)
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2014/02/28
Re: [Denovoassembler-users] Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
David Eccles (gringer)
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2014/02/25
[Denovoassembler-users] Coverage Distribution Analysis guesses coverage peak of 2 instead of 500
David Eccles (gringer)
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2014/02/24
[Denovoassembler-users] RE : What is the minimum read length for Running Ray-meta
Sébastien Boisvert
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2014/02/24
[Denovoassembler-users] What is the minimum read length for Running Ray-meta
Raja durai
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2014/02/21
[Denovoassembler-users] RE : Ray on Redhat vs Debian
Sébastien Boisvert
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2014/02/18
[Denovoassembler-users] RE : Ray on Redhat vs Debian
Sébastien Boisvert
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2014/02/17
Re: [Denovoassembler-users] Ray on Redhat vs Debian
jjv5
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2014/02/17
[Denovoassembler-users] Ray on Redhat vs Debian
Tan, Yifang
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2014/02/17
[Denovoassembler-users] RE : RE : How to determine unassigned reads or contigs in Ray communities
Sébastien Boisvert
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2014/02/17
Re: [Denovoassembler-users] RE : How to determine unassigned reads or contigs in Ray communities
jjv5
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2014/02/17
[Denovoassembler-users] RE : How to determine unassigned reads or contigs in Ray communities
Sébastien Boisvert
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2014/02/13
[Denovoassembler-users] How to determine unassigned reads or contigs in Ray communities
jjv5
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2014/02/12
Re: [Denovoassembler-users] Decreasing assembly quality with increasing kmer values
Hornung, Bastian
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2014/02/12
Re: [Denovoassembler-users] Decreasing assembly quality with increasing kmer values
Rick Westerman
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2014/02/12
[Denovoassembler-users] Decreasing assembly quality with increasing kmer values
Nathaniel Jue
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2014/02/12
[Denovoassembler-users] Ray 2.3.1
Sébastien Boisvert
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2014/02/05
[Denovoassembler-users] RE : Using Ray deterministically
Sébastien Boisvert
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2014/02/05
[Denovoassembler-users] Using Ray deterministically
Ino de Bruijn
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2014/02/01
Re: [Denovoassembler-users] RE : different machine, new openmpi 1.6.5 build, new problem
Scott Monsma
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2014/02/01
[Denovoassembler-users] RE : different machine, new openmpi 1.6.5 build, new problem
Sébastien Boisvert
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2014/01/31
Re: [Denovoassembler-users] RE : RE : Segmentation fault with -k 31
Miller, Ruth
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2014/01/31
[Denovoassembler-users] different machine, new openmpi 1.6.5 build, new problem
Scott Monsma
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2014/01/30
[Denovoassembler-users] RE : mpi error?
Sébastien Boisvert
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2014/01/30
[Denovoassembler-users] RE : RE : Segmentation fault with -k 31
Sébastien Boisvert
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2014/01/30
Re: [Denovoassembler-users] RE : Segmentation fault with -k 31
Hornung, Bastian
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2014/01/29
[Denovoassembler-users] mpi error?
Scott Monsma
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2014/01/29
Re: [Denovoassembler-users] RE : Segmentation fault with -k 31
Miller, Ruth
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2014/01/29
Re: [Denovoassembler-users] Mavericks build failure: 'make: *** [code/SeedingData/PathHandle.o] Error 1'
Bede Constantinides
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2014/01/29
Re: [Denovoassembler-users] Mavericks build failure: 'make: *** [code/SeedingData/PathHandle.o] Error 1'
François Olivier Gagnon-Hébert
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2014/01/29
[Denovoassembler-users] RE : Segmentation fault with -k 31
Sébastien Boisvert
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2014/01/29
[Denovoassembler-users] RE : Mavericks build failure: 'make: *** [code/SeedingData/PathHandle.o] Error 1'
Sébastien Boisvert
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2014/01/27
[Denovoassembler-users] Segmentation fault with -k 31
Miller, Ruth
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2014/01/27
[Denovoassembler-users] RE : Mavericks build failure: 'make: *** [code/SeedingData/PathHandle.o] Error 1'
Sébastien Boisvert
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2014/01/27
Re: [Denovoassembler-users] Mavericks build failure: 'make: *** [code/SeedingData/PathHandle.o] Error 1'
Bede Constantinides
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2014/01/27
[Denovoassembler-users] Mavericks build failure: 'make: *** [code/SeedingData/PathHandle.o] Error 1'
Bede Constantinides
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2014/01/27
[Denovoassembler-users] RE : Polymorphic genome assembly
Sébastien Boisvert
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2014/01/25
Re: [Denovoassembler-users] Polymorphic genome assembly
Adrian Pelin
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2014/01/25
[Denovoassembler-users] RE : assembly of simulated data
Sébastien Boisvert
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2014/01/25
[Denovoassembler-users] RE : assembly of simulated data
Sébastien Boisvert
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2014/01/24
[Denovoassembler-users] assembly of simulated data
Peter Huang
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2014/01/23
Re: [Denovoassembler-users] RE : Problem compiling Ray 2.3.0 - Mac OS X 9.2
Egon Ozer
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2014/01/23
[Denovoassembler-users] RE : Problem compiling Ray 2.3.0 - Mac OS X 9.2
Sébastien Boisvert
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2014/01/23
[Denovoassembler-users] RE : Problem compiling Ray 2.3.0 - Mac OS X 9.2
Sébastien Boisvert
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2014/01/23
[Denovoassembler-users] RE : Problem compiling Ray 2.3.0 - Mac OS X 9.2
Sébastien Boisvert
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2014/01/23
[Denovoassembler-users] Problem compiling Ray 2.3.0 - Mac OS X 9.2
François Olivier Gagnon-Hébert
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2014/01/22
Re: [Denovoassembler-users] Compiling and running Ray on Gentoo
Pabinger Stephan
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2014/01/21
[Denovoassembler-users] RE : Compiling and running Ray on Gentoo
Sébastien Boisvert
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2014/01/21
Re: [Denovoassembler-users] Compiling and running Ray on Gentoo
Pabinger Stephan
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2014/01/16
Re: [Denovoassembler-users] Compiling and running Ray on Gentoo
Sébastien Boisvert
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2014/01/14
Re: [Denovoassembler-users] Regarding Ray
Sébastien Boisvert
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2014/01/13
Re: [Denovoassembler-users] error in running Ray with communities...need help
Sébastien Boisvert
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2014/01/12
Re: [Denovoassembler-users] Ray on x86 seg fault: Address not mapped (Vertex::addRead)
Jeff Tan
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2014/01/09
Re: [Denovoassembler-users] _pmiu_daemon(SIGCHLD) segfault using Ray version 2.3.1-devel and Ray-2.3.0
Sébastien Boisvert
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2014/01/09
Re: [Denovoassembler-users] Ray on x86 seg fault: Address not mapped (Vertex::addRead)
Sébastien Boisvert
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2014/01/09
Re: [Denovoassembler-users] Ray is crashing for no apparent reason
Sébastien Boisvert
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2014/01/09
Re: [Denovoassembler-users] Ray installation error : SEEK_SET is #defined but must not be for the C++ binding of MPI. Include mpi.h before stdio.h"
Sébastien Boisvert
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2014/01/08
Re: [Denovoassembler-users] Ray DNA Nexus error report
Sébastien Boisvert
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2014/01/08
Re: [Denovoassembler-users] Ray Assembly with Mate Pairs?
Sébastien Boisvert
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2014/01/08
Re: [Denovoassembler-users] Ray Assembly with Mate Pairs?
Sébastien Boisvert
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2014/01/08
Re: [Denovoassembler-users] Ray Assembly with Mate Pairs?
Hornung, Bastian
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2014/01/07
Re: [Denovoassembler-users] Ray Assembly with Mate Pairs?
Sébastien Boisvert
-
2014/01/07
Re: [Denovoassembler-users] Ray Assembly with Mate Pairs?
Sébastien Boisvert
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2014/01/07
[Denovoassembler-users] Ray Assembly with Mate Pairs?
Rick White
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2014/01/07
Re: [Denovoassembler-users] largest kmer-value?
Hornung, Bastian
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2014/01/06
Re: [Denovoassembler-users] largest kmer-value?
Sébastien Boisvert
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2014/01/06
Re: [Denovoassembler-users] Memory Issue
David Eccles (gringer)
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2014/01/05
[Denovoassembler-users] Memory Issue
Munish Mehta
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2013/12/27
Re: [Denovoassembler-users] Installation of Ray 2.3.0 in cluster
Sébastien Boisvert
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2013/12/27
Re: [Denovoassembler-users] Path handle Re: Ray 2.3.0 actor...
Sébastien Boisvert
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2013/12/27
Re: [Denovoassembler-users] Ion Torrent + Illumina Hybrid Assembly on Ray
Sébastien Boisvert
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2013/12/27
Re: [Denovoassembler-users] Question about Ray in the Cloud
Sébastien Boisvert
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2013/12/27
Re: [Denovoassembler-users] Ray installation error : SEEK_SET is #defined but must not be for the C++ binding of MPI. Include mpi.h before stdio.h"
Sébastien Boisvert
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2013/12/26
[Denovoassembler-users] Ray installation error : SEEK_SET is #defined but must not be for the C++ binding of MPI. Include mpi.h before stdio.h"
Sucheta Tripathy
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2013/12/23
[Denovoassembler-users] Installation of Ray 2.3.0 in cluster
Sucheta Tripathy
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2013/12/19
Re: [Denovoassembler-users] FW: error issues: Parent and child are the same: 1 and 1
Sébastien Boisvert
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2013/12/18
Re: [Denovoassembler-users] Question GO terms
Sébastien Boisvert
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2013/12/18
Re: [Denovoassembler-users] Question GO terms
JC Grenier
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2013/12/18
Re: [Denovoassembler-users] Question GO terms
Sébastien Boisvert
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2013/12/18
[Denovoassembler-users] Question about Ray in the Cloud
Santiago Revale
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2013/12/18
[Denovoassembler-users] מיקום ORF
שירלי קרוגר
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2013/12/14
Re: [Denovoassembler-users] Running meta ray
sheerli kruger
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2013/12/13
Re: [Denovoassembler-users] Does the read length ave to be the same?
Hornung, Bastian