Hi, This is probably related to MAXKMERLENGTH=64, I will try to find the issue.
I will look at your trace. On 11/12/11 10:04 PM, Louis Letourneau wrote: > I'm running ray in MPI mode and I keep getting this backtrace: > > Ray:21253 terminated with signal 11 at PC=47bcc0 SP=7fff1da0d818. > Backtrace: > /lb/project/bws-221-aa/software/assemblers/Ray-1.7/Ray(_ZNK14ReadAnnotation7getRankEv+0x0)[0x47bcc0] > /lb/project/bws-221-aa/software/assemblers/Ray-1.7/Ray(_ZN16MessageProcessor37call_RAY_MPI_TAG_REQUEST_VERTEX_READSEP7Message+0x11a)[0x435f2a] > /lb/project/bws-221-aa/software/assemblers/Ray-1.7/Ray(_ZN7Machine10runVanillaEv+0x24)[0x44b734] > /lb/project/bws-221-aa/software/assemblers/Ray-1.7/Ray(_ZN7Machine5startEv+0x16d0)[0x452560] > /lb/project/bws-221-aa/software/assemblers/Ray-1.7/Ray(main+0x3c)[0x4bcedc] > /lib64/libc.so.6(__libc_start_main+0xf4)[0x3ef5e1d994] > /lb/project/bws-221-aa/software/assemblers/Ray-1.7/Ray(__gxx_personality_v0+0x221)[0x4281f9] > > > My settings: > Ray version 1.7.0 RAY_64_BITS > License: GNU General Public License > > MAXKMERLENGTH: 64 > KMER_U64_ARRAY_SIZE: 2 > MAXIMUM_MESSAGE_SIZE_IN_BYTES: 4000 bytes > FORCE_PACKING (don't align addresses on 8 bytes): y > ASSERT: y > HAVE_LIBZ (gz support): y > HAVE_LIBBZ2 (bz2 support): y > > Rank 0: Operating System: Linux (__linux__) POSIX (OS_POSIX) > Linux (__linux__): y > GNU system (__GNUC__): y > Message-passing interface > > Rank 0: Message-Passing Interface implementation: Open-MPI (OMPI_MPI_H) > 1.4.3 > Rank 0: Message-Passing Interface standard version: 2.1 > > > Any ideas? > > If not I guess I'll need to gdb. > > Thanks > > ------------------------------------------------------------------------------ > Learn Windows Azure Live! Tuesday, Dec 13, 2011 > Microsoft is holding a special Learn Windows Azure training event for > developers. It will provide a great way to learn Windows Azure and what it > provides. You can attend the event by watching it streamed LIVE online. > Learn more at http://p.sf.net/sfu/ms-windowsazure > _______________________________________________ > Denovoassembler-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/denovoassembler-users > ------------------------------------------------------------------------------ Learn Windows Azure Live! Tuesday, Dec 13, 2011 Microsoft is holding a special Learn Windows Azure training event for developers. It will provide a great way to learn Windows Azure and what it provides. You can attend the event by watching it streamed LIVE online. Learn more at http://p.sf.net/sfu/ms-windowsazure _______________________________________________ Denovoassembler-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
