Adrian had more issues than I did. I now rarely need checkpoints since my job finish in a timely manner with X thousands of cores now.
It's nice that you found the issue though. Louis ________________________________________ From: Sébastien Boisvert [sebastien.boisver...@ulaval.ca] Sent: Thursday, December 13, 2012 12:02 PM To: Louis Letourneau Cc: denovoassembler-users@lists.sourceforge.net Subject: Regression in the checkpointing system Hello Louis, A few months ago, you told me that Ray v1.7 was better than both Ray 2.0.0 and Ray 2.1.0 for your work. I also remember that you are using the checkpointing in Ray. I just found out that the checkpointing in Ray is broken since 2.0.0 for the extension of seeds. So any job that starts from seeds that are in checkpoints won't produce any extension and contigs will therefore be short. I will cook a patch for this. -Sébastien ------------------------------------------------------------------------------ LogMeIn Rescue: Anywhere, Anytime Remote support for IT. Free Trial Remotely access PCs and mobile devices and provide instant support Improve your efficiency, and focus on delivering more value-add services Discover what IT Professionals Know. Rescue delivers http://p.sf.net/sfu/logmein_12329d2d _______________________________________________ Denovoassembler-users mailing list Denovoassembler-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
