On 02/12/13 12:00 PM, MacManes, Matthew wrote: > Hello, > > Does anybody have experience using Ray on a Cray XE system? > > make MAXKMERLENGTH=96 > CXX code/application_core/ray_main.o > make: mpicxx: Command not found >
For example, mpicxx invokes "g++ -I/usr/include/openmpi-x86_64 -pthread -m64 -L/usr/lib64/openmpi/lib -lmpi_cxx -lmpi" on my box. I think that the compiler is CC with the module cray-mpich2. So just run this: make MPICXX=CC > mpicxx is not found- indeed, the MPI implementation is cray-mpich2/5.6.4 > > OpenMPI not available. What is best way to get Ray up and running here? > > Thanks, Matt > _____________________________________ > *Matthew MacManes, Ph.D. * > University of New Hampshire I Assistant Professor > Department of Molecular, Cellular, & Biomedical Sciences > Durham, NH 03824 > Phone: 603-862-4052I Twitter: @PeroMHC <https://twitter.com/PeroMHC> > Web: genomebio.org <http://genomebio.org/> > Office: 189 Rudman Hall > Laboratory: 145 Rudman Hall > ------------------------------------------------------------------------------ Sponsored by Intel(R) XDK Develop, test and display web and hybrid apps with a single code base. Download it for free now! http://pubads.g.doubleclick.net/gampad/clk?id=111408631&iu=/4140/ostg.clktrk _______________________________________________ Denovoassembler-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
