You can use Assembly/BiologicalAbundances/_DeNovoAssembly/Contigs.tsv. The column "Colored k-mers" tells how many k-mers in the contig are colored. 0 means that the contig is unassigned.
________________________________ > From: anna.sandion...@unimib.it > Date: Thu, 3 Apr 2014 12:34:44 +0200 > Subject: Info on MetaRay > To: s...@boisvert.info > > Hi Sébastien > > My names is Anna, > Firstly I would said you that I really appreciate your work..Ray is a > great tool for De novo analysis! > I write you for some question about the out put data > > I used Ray-Communities to found bacterial matches (I used NCBI-taxonomy > plugins) but I have not figured out how to display some results. I'm > looking for not bacteria contings. Where can I find statistics about > contings that not matches with bacteria sequences? > > thanks you a lot for the help > > Best wishes > > Anna > -- > Anna Sandionigi Ph.D > Universita' degli Studi di Milano Bicocca > ZooPlantLab > www.zooplantlab.btbs.unimib.it<http://www.zooplantlab.btbs.unimib.it/> > BTBS - Dipartimento di Biotecnologie e Bioscienze > Piazza della Scienza 2 -- 20126 Milano - Italy > Tel. Lab. +39 02 64483334 Fax +39 02 64483450 ------------------------------------------------------------------------------ Is your legacy SCM system holding you back? Join Perforce May 7 to find out: • 3 signs your SCM is hindering your productivity • Requirements for releasing software faster • Expert tips and advice for migrating your SCM now http://p.sf.net/sfu/perforce _______________________________________________ Denovoassembler-users mailing list Denovoassembler-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
