Dear Devoassembler users and Sébastien,
I have recently started using Ray Meta on some Illumina (HiSeq) RNA-Seq
data as this tool has been used by some collaborators with great success.
I have been trying to tweak my assemblies by varying the kmer length and
assessing the number of contigs, length of contigs etc. However, i was
curious what else can be done in this regard? Much of our work is
discovery, therefore, it's difficult to compare to known reference genomes.
Can anyone suggest other ways of tweaking the data, or visualising the
assemblies?
Thanks
David
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