The reads are numbered using their ordering when concatenating the input files.
________________________________ From: Namrata Patel [namratapatel...@gmail.com] Sent: Tuesday, June 09, 2015 11:48 PM To: Boisvert, Sebastien Subject: About Read Names in Ray Meta Hello Sir, I am Trying to run Ray Meta for my Metagenomic data, and i want to know which reads were used to form a particular Contig. I tried to run Ray Meta with -amos option and it is giving me AMOS.afg file. When i am parsing this .afg file to get reads used in contigs, it gives me numbers instead of read names. Please tell me what this numbers are or how can i get reads used in each contig. Awaiting for Your Kind Response, Thanking You, Namrata Patel
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