Re: [Denovoassembler-users] Request for guidance

[Pier-Luc Plante]

Hi Jason, you have to set HAVE_LIBZ  in the Makefile. Pier-Luc Le 2016-11-15 à 08:48, Jason Tan a écrit : Hi Admin, I followed the INSTALL.txt guideline as attached to install Ray but i have no clue to go further. Could you please guide me how to enable .gz support? Thanks Jason On Tue, Nov 15, 2016 at 9:12 PM, Sébastien Boisvert <s...@boisvert.info> wrote: Hi Jason, Please post your questions to the mailing list (in CC). Did you enable .gz support when you built the software Ray from source ? From: Jason Tan <jasonta...@gmail.com> Sent: November 15, 2016 3:47 AM To: s...@boisvert.info Subject: Request for guidance   Dear Admin, Thank you for contributing this useful piece of software. I am using Ubuntu as my working platform but i received an error "Rank 0 : no input files, aborting" when i executed Ray program of Ray-2.3.1.tar.bz2 which is downloaded from this website https://sourceforge.net/projects/denovoassembler/files/ Ray, a de novo assembler using MPI 2.2 - Browse Files at ... sourceforge.net Ray -- Parallel genome assemblies for parallel DNA sequencing The command that i entered was    mpiexec -n 2 ray-build/Ray -detect-sequence-files SRR1633365 -show memory-usage and the file SRR1633365.fastq.gz is in the folder SRR1633365 However, when i installed the Ray by using this command, it can be executed successfully. sudo apt-get install Ray mpiexec -n 2 Ray -detect-sequence-files SRR1633365 -show memory-usage Could you please guide me the solution to this problem? Thanks Jason

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