Hi, Thanks for replies. I have another issue with inputs. When I give some complex url such as.
http://localhost:8094/geoserver/Dhara/ows?service=WFS&version=1.0.0&request=GetFeature&typeName=Dhara:Rd_Bulathsinhala2&maxFeatures=50&outputFormat=GML2 for the input which is defined as a string paramater I get the following error. Input is given to the simple echo application. (echo %1) But URL's such as http://localhost:8093/wps/WebProcessingService works fine. Seems like equal sign makes some trouble. <ns:invokingServiceFailed infoModelVersion="2.6" xmlns:ns="http://airavata.apache.org/schemas/wft/2011/08";> <ns:notificationSource ns:serviceID="Workflow1_4830e475_b139_4e85_9d6b_8b10fc38afad" ns:experimentID="Workflow1_4830e475-b139-4e85-9d6b-8b10fc38afad" /> <ns:timestamp>2013-10-20T16:02:29.398+05:30</ns:timestamp> <ns:description>Error in invoking a service: <wsdl:definitions name="Echo" targetNamespace="http://airavata.apache.org/schemas/gfac/2012/12"; xmlns:typens="http://airavata.apache.org/schemas/gfac/2012/12/Echo/xsd"; xmlns:wsa="http://www.w3.org/2005/08/addressing"; xmlns:xsd=" http://www.w3.org/2001/XMLSchema"; xmlns:globalTypens=" http://airavata.apache.org/schemas/gfac/2012/12/xsd"; xmlns:wsdlns=" http://airavata.apache.org/schemas/gfac/2012/12"; xmlns:soap=" http://schemas.xmlsoap.org/wsdl/soap/"; xmlns:gfac=" http://airavata.apache.org/schemas/gfac/2012/12"; xmlns:wsdl=" http://schemas.xmlsoap.org/wsdl/";> <wsdl:types> <schema elementFormDefault="unqualified" targetNamespace=" http://airavata.apache.org/schemas/gfac/2012/12/Echo/xsd"; xmlns=" http://www.w3.org/2001/XMLSchema";> <import namespace="http://airavata.apache.org/schemas/gfac/2012/12"; schemaLocation=" http://airavata.apache.org/schemas/gfac/2012/12/GFacParameterTypes.xsd"; /> <element name="invoke_InputParams" type="typens:invoke_InputParamsType" /> <complexType name="invoke_InputParamsType"> <sequence> <element name="input" type="gfac:StringParameterType"> <annotation> <documentation /> </annotation> </element> </sequence> </complexType> <element name="invoke_OutputParams" type="typens:invoke_OutputParamsType" /> <complexType name="invoke_OutputParamsType"> <sequence> <element name="output" type="gfac:StdOutParameterType"> <annotation> <documentation /> </annotation> </element> </sequence> </complexType> </schema> </wsdl:types> <wsdl:message name="invoke_RequestMessage_77019bf3-cef5-4129-bd6f-5e7569d9757d"> <wsdl:part name="parameters" element="typens:invoke_InputParams"> </wsdl:part> </wsdl:message> <wsdl:message name="invoke_ResponseMessage_d24d72bc-26c0-4870-89cf-840e7fd19639"> <wsdl:part name="parameters" element="typens:invoke_OutputParams"> </wsdl:part> </wsdl:message> <wsdl:portType name="Echo"> <wsdl:documentation /> <wsdl:operation name="invoke"> <wsdl:documentation /> <wsdl:input name="invoke_RequestMessage_77019bf3-cef5-4129-bd6f-5e7569d9757d" message="wsdlns:invoke_RequestMessage_77019bf3-cef5-4129-bd6f-5e7569d9757d"> </wsdl:input> <wsdl:output name="invoke_ResponseMessage_d24d72bc-26c0-4870-89cf-840e7fd19639" message="wsdlns:invoke_ResponseMessage_d24d72bc-26c0-4870-89cf-840e7fd19639"> </wsdl:output> </wsdl:operation> </wsdl:portType> </wsdl:definitions>: org.apache.axiom.om.OMException: [com.ctc.wstx.exc.WstxLazyException] com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code 61); expected a semi-colon after the reference for entity 'version' at [row,col {unknown-source}]: [1,69]</ns:description> <ns:annotation> <stackTrace>org.apache.axiom.om.OMException: [com.ctc.wstx.exc.WstxLazyException] com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code 61); expected a semi-colon after the reference for entity 'version' at [row,col {unknown-source}]: [1,69] at org.apache.axiom.om.impl.builder.StAXOMBuilder.next(StAXOMBuilder.java:260) at org.apache.axiom.om.impl.llom.OMElementImpl.buildNext(OMElementImpl.java:664) at org.apache.axiom.om.impl.llom.OMElementImpl.getFirstOMChild(OMElementImpl.java:681) at org.apache.axiom.om.impl.llom.OMElementImpl.getText(OMElementImpl.java:845) at org.apache.airavata.gfac.utils.GFacUtils.getInputActualParameter(GFacUtils.java:150) at org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.getInParameters(EmbeddedGFacInvoker.java:515) at org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:299) at org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:682) at org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:501) at org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:186) at org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:385) at org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:78) at org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:378) at java.lang.Thread.run(Thread.java:722) Caused by: [com.ctc.wstx.exc.WstxLazyException] com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code 61); expected a semi-colon after the reference for entity 'version' at [row,col {unknown-source}]: [1,69] at com.ctc.wstx.exc.WstxLazyException.throwLazily(WstxLazyException.java:45) at com.ctc.wstx.sr.StreamScanner.throwLazyError(StreamScanner.java:704) at com.ctc.wstx.sr.BasicStreamReader.safeFinishToken(BasicStreamReader.java:3657) at com.ctc.wstx.sr.BasicStreamReader.getText(BasicStreamReader.java:809) at javax.xml.stream.util.StreamReaderDelegate.getText(StreamReaderDelegate.java:201) at org.apache.axiom.om.impl.builder.SafeXMLStreamReader.getText(SafeXMLStreamReader.java:101) at org.apache.axiom.om.impl.builder.StAXBuilder.createOMText(StAXBuilder.java:276) at org.apache.axiom.om.impl.builder.StAXBuilder.createOMText(StAXBuilder.java:246) at org.apache.axiom.om.impl.builder.StAXOMBuilder.next(StAXOMBuilder.java:217) ... 13 more Caused by: com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code 61); expected a semi-colon after the reference for entity 'version' at [row,col {unknown-source}]: [1,69] at com.ctc.wstx.sr.StreamScanner.throwUnexpectedChar(StreamScanner.java:623) at com.ctc.wstx.sr.StreamScanner.parseEntityName(StreamScanner.java:1969) at com.ctc.wstx.sr.StreamScanner.fullyResolveEntity(StreamScanner.java:1471) at com.ctc.wstx.sr.BasicStreamReader.readTextSecondary(BasicStreamReader.java:4679) at com.ctc.wstx.sr.BasicStreamReader.readCoalescedText(BasicStreamReader.java:4124) at com.ctc.wstx.sr.BasicStreamReader.finishToken(BasicStreamReader.java:3699) at com.ctc.wstx.sr.BasicStreamReader.safeFinishToken(BasicStreamReader.java:3647) ... 19 more </stackTrace> </ns:annotation> <ns:receiver ns:serviceID="Workflow1_4830e475_b139_4e85_9d6b_8b10fc38afad" /> <ns:failure> <ns:trace xsi:type="xs:string" xmlns:xs=" http://www.w3.org/2001/XMLSchema"; xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; xmlns:ns="http://airavata.apache.org/schemas/wft/2011/08";>org.apache.axiom.om.OMException: [com.ctc.wstx.exc.WstxLazyException] com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code 61); expected a semi-colon after the reference for entity 'version' at [row,col {unknown-source}]: [1,69] at org.apache.axiom.om.impl.builder.StAXOMBuilder.next(StAXOMBuilder.java:260) at org.apache.axiom.om.impl.llom.OMElementImpl.buildNext(OMElementImpl.java:664) at org.apache.axiom.om.impl.llom.OMElementImpl.getFirstOMChild(OMElementImpl.java:681) at org.apache.axiom.om.impl.llom.OMElementImpl.getText(OMElementImpl.java:845) at org.apache.airavata.gfac.utils.GFacUtils.getInputActualParameter(GFacUtils.java:150) at org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.getInParameters(EmbeddedGFacInvoker.java:515) at org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:299) at org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:682) at org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:501) at org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:186) at org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:385) at org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:78) at org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:378) at java.lang.Thread.run(Thread.java:722) Caused by: [com.ctc.wstx.exc.WstxLazyException] com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code 61); expected a semi-colon after the reference for entity 'version' at [row,col {unknown-source}]: [1,69] at com.ctc.wstx.exc.WstxLazyException.throwLazily(WstxLazyException.java:45) at com.ctc.wstx.sr.StreamScanner.throwLazyError(StreamScanner.java:704) at com.ctc.wstx.sr.BasicStreamReader.safeFinishToken(BasicStreamReader.java:3657) at com.ctc.wstx.sr.BasicStreamReader.getText(BasicStreamReader.java:809) at javax.xml.stream.util.StreamReaderDelegate.getText(StreamReaderDelegate.java:201) at org.apache.axiom.om.impl.builder.SafeXMLStreamReader.getText(SafeXMLStreamReader.java:101) at org.apache.axiom.om.impl.builder.StAXBuilder.createOMText(StAXBuilder.java:276) at org.apache.axiom.om.impl.builder.StAXBuilder.createOMText(StAXBuilder.java:246) at org.apache.axiom.om.impl.builder.StAXOMBuilder.next(StAXOMBuilder.java:217) ... 13 more Caused by: com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code 61); expected a semi-colon after the reference for entity 'version' at [row,col {unknown-source}]: [1,69] at com.ctc.wstx.sr.StreamScanner.throwUnexpectedChar(StreamScanner.java:623) at com.ctc.wstx.sr.StreamScanner.parseEntityName(StreamScanner.java:1969) at com.ctc.wstx.sr.StreamScanner.fullyResolveEntity(StreamScanner.java:1471) at com.ctc.wstx.sr.BasicStreamReader.readTextSecondary(BasicStreamReader.java:4679) at com.ctc.wstx.sr.BasicStreamReader.readCoalescedText(BasicStreamReader.java:4124) at com.ctc.wstx.sr.BasicStreamReader.finishToken(BasicStreamReader.java:3699) at com.ctc.wstx.sr.BasicStreamReader.safeFinishToken(BasicStreamReader.java:3647) ... 19 more </ns:trace> </ns:failure> </ns:invokingServiceFailed> Any ideas on how to give some complex URL's like that as an inputs. Thank You ! On Sat, Oct 19, 2013 at 1:29 AM, Lahiru Gunathilake <[email protected]>wrote: > I think we need to fix the regex and make it configurable rather hard > coding. > > Lahiru > > > On Fri, Oct 18, 2013 at 11:26 AM, Raminder Singh <[email protected] > > wrote: > >> There is a problem with the regex to read outputs. This is a defect [1] >> and need to be fixed. >> >> 1. https://issues.apache.org/jira/browse/AIRAVATA-933 >> >> On Oct 18, 2013, at 4:27 AM, Ishara RANATUNGA <[email protected]> >> wrote: >> >> >> Hi, >> >> Thanks a lot for the help. We are in the process of chaining wps >> processes and in some cases sending GML output of the WPS to a map at a >> portal. >> >> We get a larger String with spaces, EOL characters etc. I found that >> having something like >> >> @echo off >> >> echo output=hello world >> >> only gives me only the String "hello" to the second component. >> >> I want to input entire String as it is to the second component. How is >> this possible? Your thoughts are very helpful. >> >> Thank You ! >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> On Thu, Oct 17, 2013 at 11:43 PM, Raminder Singh < >> [email protected]> wrote: >> >>> Everything you are doing looks good to me. You can use String data type >>> in this case for both output of component 1 and input of component 2. You >>> need to name the output parameter as "output". Input parameter name does >>> not matter. Here is some information on other data types used in different >>> projects: >>> >>> URI: Incase you want to move files. >>> URIArray: if these are more than one files. >>> >>> Please share your requirements and we will be able to advise/help you >>> better. >>> >>> Thanks >>> Raminder >>> >>> On Oct 17, 2013, at 1:51 PM, Ishara RANATUNGA <[email protected]> >>> wrote: >>> >>> > Hi, >>> > >>> > I have small issue regarding creating components by wrapping the >>> applications. Lets assume I have created a small java application that >>> prints out some string. >>> > >>> > Eg: System.out.println("Output of process 1"); >>> > >>> > And I wrote a script wrapping the jar which outputs the above >>> statement. >>> > >>> > @echo off >>> > >>> > echo output=E:\FYP\Other\outGMLFromAirvata\ >>> > java -jar >>> E:\FYP\projects\wrapper\out\artifacts\wrapper_jar\wrapper.jar %1 >>> > >>> > >>> > Then I could load the component Register Application --> New >>> deployment--> Register. >>> > Then I can create a simple workflow input--> component1 --> output >>> which executes and gives the output "Output of process 1". >>> > (Output data type of the component std out) >>> > >>> > >>> > >>> > Then I have another application that needs to input the string "Output >>> of process 1" from component 1 and needs to output the the String "Output >>> of process 2". I created a java application that does that and wrapped >>> using another wrapper and loaded the component as described above. >>> > I used 'string' as second component's input data type where it does >>> not work. >>> > >>> > What are the correct data types of output of component 1 and input of >>> component 2. Or did I do anything wrong when wrapping the applications. >>> Your kind help is really appreciated and thanks a lot for the help so far. >>> > >>> > Thank You ! >>> > >>> > >>> > >>> > >>> > >>> > >>> >>> >> >> > > > -- > System Analyst Programmer > PTI Lab > Indiana University >
