Is it possible for you to use some URL encoder? SOAP message does not allow special char as part of request. This is a good thing to handle in Airavata API but for now you need to encode. Please feel free to create JIRAs for any issue you are facing and if possible submit patches.
Thanks Raminder On Oct 20, 2013, at 6:40 AM, Ishara RANATUNGA <[email protected]> wrote: > Hi, > > Thanks for replies. I have another issue with inputs. When I give some > complex url such as. > > http://localhost:8094/geoserver/Dhara/ows?service=WFS&version=1.0.0&request=GetFeature&typeName=Dhara:Rd_Bulathsinhala2&maxFeatures=50&outputFormat=GML2 > > for the input which is defined as a string paramater I get the following > error. Input is given to the simple echo application. > > (echo %1) > > But URL's such as http://localhost:8093/wps/WebProcessingService works > fine. Seems like equal sign makes some trouble. > > > <ns:invokingServiceFailed infoModelVersion="2.6" > xmlns:ns="http://airavata.apache.org/schemas/wft/2011/08";> > <ns:notificationSource > ns:serviceID="Workflow1_4830e475_b139_4e85_9d6b_8b10fc38afad" > ns:experimentID="Workflow1_4830e475-b139-4e85-9d6b-8b10fc38afad" /> > <ns:timestamp>2013-10-20T16:02:29.398+05:30</ns:timestamp> > <ns:description>Error in invoking a service: <wsdl:definitions > name="Echo" targetNamespace="http://airavata.apache.org/schemas/gfac/2012/12"; > xmlns:typens="http://airavata.apache.org/schemas/gfac/2012/12/Echo/xsd"; > xmlns:wsa="http://www.w3.org/2005/08/addressing"; > xmlns:xsd="http://www.w3.org/2001/XMLSchema"; > xmlns:globalTypens="http://airavata.apache.org/schemas/gfac/2012/12/xsd"; > xmlns:wsdlns="http://airavata.apache.org/schemas/gfac/2012/12"; > xmlns:soap="http://schemas.xmlsoap.org/wsdl/soap/"; > xmlns:gfac="http://airavata.apache.org/schemas/gfac/2012/12"; > xmlns:wsdl="http://schemas.xmlsoap.org/wsdl/";> > <wsdl:types> > <schema elementFormDefault="unqualified" > targetNamespace="http://airavata.apache.org/schemas/gfac/2012/12/Echo/xsd"; > xmlns="http://www.w3.org/2001/XMLSchema";> > <import namespace="http://airavata.apache.org/schemas/gfac/2012/12"; > schemaLocation="http://airavata.apache.org/schemas/gfac/2012/12/GFacParameterTypes.xsd"; > /> > <element name="invoke_InputParams" > type="typens:invoke_InputParamsType" /> > <complexType name="invoke_InputParamsType"> > <sequence> > <element name="input" type="gfac:StringParameterType"> > <annotation> > <documentation /> > </annotation> > </element> > </sequence> > </complexType> > <element name="invoke_OutputParams" > type="typens:invoke_OutputParamsType" /> > <complexType name="invoke_OutputParamsType"> > <sequence> > <element name="output" type="gfac:StdOutParameterType"> > <annotation> > <documentation /> > </annotation> > </element> > </sequence> > </complexType> > </schema> > </wsdl:types> > <wsdl:message > name="invoke_RequestMessage_77019bf3-cef5-4129-bd6f-5e7569d9757d"> > <wsdl:part name="parameters" element="typens:invoke_InputParams"> > </wsdl:part> > </wsdl:message> > <wsdl:message > name="invoke_ResponseMessage_d24d72bc-26c0-4870-89cf-840e7fd19639"> > <wsdl:part name="parameters" element="typens:invoke_OutputParams"> > </wsdl:part> > </wsdl:message> > <wsdl:portType name="Echo"> > <wsdl:documentation /> > <wsdl:operation name="invoke"> > <wsdl:documentation /> > <wsdl:input > name="invoke_RequestMessage_77019bf3-cef5-4129-bd6f-5e7569d9757d" > message="wsdlns:invoke_RequestMessage_77019bf3-cef5-4129-bd6f-5e7569d9757d"> > </wsdl:input> > <wsdl:output > name="invoke_ResponseMessage_d24d72bc-26c0-4870-89cf-840e7fd19639" > message="wsdlns:invoke_ResponseMessage_d24d72bc-26c0-4870-89cf-840e7fd19639"> > </wsdl:output> > </wsdl:operation> > </wsdl:portType> > </wsdl:definitions>: org.apache.axiom.om.OMException: > [com.ctc.wstx.exc.WstxLazyException] > com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code > 61); expected a semi-colon after the reference for entity 'version' > at [row,col {unknown-source}]: [1,69]</ns:description> > <ns:annotation> > <stackTrace>org.apache.axiom.om.OMException: > [com.ctc.wstx.exc.WstxLazyException] > com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code > 61); expected a semi-colon after the reference for entity 'version' > at [row,col {unknown-source}]: [1,69] > at > org.apache.axiom.om.impl.builder.StAXOMBuilder.next(StAXOMBuilder.java:260) > at > org.apache.axiom.om.impl.llom.OMElementImpl.buildNext(OMElementImpl.java:664) > at > org.apache.axiom.om.impl.llom.OMElementImpl.getFirstOMChild(OMElementImpl.java:681) > at > org.apache.axiom.om.impl.llom.OMElementImpl.getText(OMElementImpl.java:845) > at > org.apache.airavata.gfac.utils.GFacUtils.getInputActualParameter(GFacUtils.java:150) > at > org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.getInParameters(EmbeddedGFacInvoker.java:515) > at > org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:299) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:682) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:501) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:186) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:385) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:78) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:378) > at java.lang.Thread.run(Thread.java:722) > Caused by: [com.ctc.wstx.exc.WstxLazyException] > com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code > 61); expected a semi-colon after the reference for entity 'version' > at [row,col {unknown-source}]: [1,69] > at > com.ctc.wstx.exc.WstxLazyException.throwLazily(WstxLazyException.java:45) > at com.ctc.wstx.sr.StreamScanner.throwLazyError(StreamScanner.java:704) > at > com.ctc.wstx.sr.BasicStreamReader.safeFinishToken(BasicStreamReader.java:3657) > at com.ctc.wstx.sr.BasicStreamReader.getText(BasicStreamReader.java:809) > at > javax.xml.stream.util.StreamReaderDelegate.getText(StreamReaderDelegate.java:201) > at > org.apache.axiom.om.impl.builder.SafeXMLStreamReader.getText(SafeXMLStreamReader.java:101) > at > org.apache.axiom.om.impl.builder.StAXBuilder.createOMText(StAXBuilder.java:276) > at > org.apache.axiom.om.impl.builder.StAXBuilder.createOMText(StAXBuilder.java:246) > at > org.apache.axiom.om.impl.builder.StAXOMBuilder.next(StAXOMBuilder.java:217) > ... 13 more > Caused by: com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character > '=' (code 61); expected a semi-colon after the reference for entity 'version' > at [row,col {unknown-source}]: [1,69] > at > com.ctc.wstx.sr.StreamScanner.throwUnexpectedChar(StreamScanner.java:623) > at > com.ctc.wstx.sr.StreamScanner.parseEntityName(StreamScanner.java:1969) > at > com.ctc.wstx.sr.StreamScanner.fullyResolveEntity(StreamScanner.java:1471) > at > com.ctc.wstx.sr.BasicStreamReader.readTextSecondary(BasicStreamReader.java:4679) > at > com.ctc.wstx.sr.BasicStreamReader.readCoalescedText(BasicStreamReader.java:4124) > at > com.ctc.wstx.sr.BasicStreamReader.finishToken(BasicStreamReader.java:3699) > at > com.ctc.wstx.sr.BasicStreamReader.safeFinishToken(BasicStreamReader.java:3647) > ... 19 more > </stackTrace> > </ns:annotation> > <ns:receiver ns:serviceID="Workflow1_4830e475_b139_4e85_9d6b_8b10fc38afad" > /> > <ns:failure> > <ns:trace xsi:type="xs:string" xmlns:xs="http://www.w3.org/2001/XMLSchema"; > xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; > > xmlns:ns="http://airavata.apache.org/schemas/wft/2011/08";>org.apache.axiom.om.OMException: > [com.ctc.wstx.exc.WstxLazyException] > com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code > 61); expected a semi-colon after the reference for entity 'version' > at [row,col {unknown-source}]: [1,69] > at > org.apache.axiom.om.impl.builder.StAXOMBuilder.next(StAXOMBuilder.java:260) > at > org.apache.axiom.om.impl.llom.OMElementImpl.buildNext(OMElementImpl.java:664) > at > org.apache.axiom.om.impl.llom.OMElementImpl.getFirstOMChild(OMElementImpl.java:681) > at > org.apache.axiom.om.impl.llom.OMElementImpl.getText(OMElementImpl.java:845) > at > org.apache.airavata.gfac.utils.GFacUtils.getInputActualParameter(GFacUtils.java:150) > at > org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.getInParameters(EmbeddedGFacInvoker.java:515) > at > org.apache.airavata.xbaya.invoker.EmbeddedGFacInvoker.invoke(EmbeddedGFacInvoker.java:299) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.handleWSComponent(WorkflowInterpreter.java:682) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.executeDynamically(WorkflowInterpreter.java:501) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpreter.scheduleDynamically(WorkflowInterpreter.java:186) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.executeWorkflow(WorkflowInterpretorSkeleton.java:385) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton.access$400(WorkflowInterpretorSkeleton.java:78) > at > org.apache.airavata.xbaya.interpretor.WorkflowInterpretorSkeleton$2.run(WorkflowInterpretorSkeleton.java:378) > at java.lang.Thread.run(Thread.java:722) > Caused by: [com.ctc.wstx.exc.WstxLazyException] > com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character '=' (code > 61); expected a semi-colon after the reference for entity 'version' > at [row,col {unknown-source}]: [1,69] > at > com.ctc.wstx.exc.WstxLazyException.throwLazily(WstxLazyException.java:45) > at com.ctc.wstx.sr.StreamScanner.throwLazyError(StreamScanner.java:704) > at > com.ctc.wstx.sr.BasicStreamReader.safeFinishToken(BasicStreamReader.java:3657) > at com.ctc.wstx.sr.BasicStreamReader.getText(BasicStreamReader.java:809) > at > javax.xml.stream.util.StreamReaderDelegate.getText(StreamReaderDelegate.java:201) > at > org.apache.axiom.om.impl.builder.SafeXMLStreamReader.getText(SafeXMLStreamReader.java:101) > at > org.apache.axiom.om.impl.builder.StAXBuilder.createOMText(StAXBuilder.java:276) > at > org.apache.axiom.om.impl.builder.StAXBuilder.createOMText(StAXBuilder.java:246) > at > org.apache.axiom.om.impl.builder.StAXOMBuilder.next(StAXOMBuilder.java:217) > ... 13 more > Caused by: com.ctc.wstx.exc.WstxUnexpectedCharException: Unexpected character > '=' (code 61); expected a semi-colon after the reference for entity 'version' > at [row,col {unknown-source}]: [1,69] > at > com.ctc.wstx.sr.StreamScanner.throwUnexpectedChar(StreamScanner.java:623) > at > com.ctc.wstx.sr.StreamScanner.parseEntityName(StreamScanner.java:1969) > at > com.ctc.wstx.sr.StreamScanner.fullyResolveEntity(StreamScanner.java:1471) > at > com.ctc.wstx.sr.BasicStreamReader.readTextSecondary(BasicStreamReader.java:4679) > at > com.ctc.wstx.sr.BasicStreamReader.readCoalescedText(BasicStreamReader.java:4124) > at > com.ctc.wstx.sr.BasicStreamReader.finishToken(BasicStreamReader.java:3699) > at > com.ctc.wstx.sr.BasicStreamReader.safeFinishToken(BasicStreamReader.java:3647) > ... 19 more > </ns:trace> > </ns:failure> > </ns:invokingServiceFailed> > > > Any ideas on how to give some complex URL's like that as an inputs. > > Thank You ! > > > > > > > On Sat, Oct 19, 2013 at 1:29 AM, Lahiru Gunathilake <[email protected]> wrote: > I think we need to fix the regex and make it configurable rather hard coding. > > Lahiru > > > On Fri, Oct 18, 2013 at 11:26 AM, Raminder Singh <[email protected]> > wrote: > There is a problem with the regex to read outputs. This is a defect [1] and > need to be fixed. > > 1. https://issues.apache.org/jira/browse/AIRAVATA-933 > > On Oct 18, 2013, at 4:27 AM, Ishara RANATUNGA <[email protected]> wrote: > >> >> Hi, >> >> Thanks a lot for the help. We are in the process of chaining wps processes >> and in some cases sending GML output of the WPS to a map at a portal. >> >> We get a larger String with spaces, EOL characters etc. I found that having >> something like >> >> @echo off >> >> echo output=hello world >> >> only gives me only the String "hello" to the second component. >> >> I want to input entire String as it is to the second component. How is this >> possible? Your thoughts are very helpful. >> >> Thank You ! >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> >> On Thu, Oct 17, 2013 at 11:43 PM, Raminder Singh <[email protected]> >> wrote: >> Everything you are doing looks good to me. You can use String data type in >> this case for both output of component 1 and input of component 2. You need >> to name the output parameter as "output". Input parameter name does not >> matter. Here is some information on other data types used in different >> projects: >> >> URI: Incase you want to move files. >> URIArray: if these are more than one files. >> >> Please share your requirements and we will be able to advise/help you better. >> >> Thanks >> Raminder >> >> On Oct 17, 2013, at 1:51 PM, Ishara RANATUNGA <[email protected]> wrote: >> >> > Hi, >> > >> > I have small issue regarding creating components by wrapping the >> > applications. Lets assume I have created a small java application that >> > prints out some string. >> > >> > Eg: System.out.println("Output of process 1"); >> > >> > And I wrote a script wrapping the jar which outputs the above statement. >> > >> > @echo off >> > >> > echo output=E:\FYP\Other\outGMLFromAirvata\ >> > java -jar E:\FYP\projects\wrapper\out\artifacts\wrapper_jar\wrapper.jar %1 >> > >> > >> > Then I could load the component Register Application --> New deployment--> >> > Register. >> > Then I can create a simple workflow input--> component1 --> output which >> > executes and gives the output "Output of process 1". >> > (Output data type of the component std out) >> > >> > >> > >> > Then I have another application that needs to input the string "Output of >> > process 1" from component 1 and needs to output the the String "Output of >> > process 2". I created a java application that does that and wrapped using >> > another wrapper and loaded the component as described above. >> > I used 'string' as second component's input data type where it does not >> > work. >> > >> > What are the correct data types of output of component 1 and input of >> > component 2. Or did I do anything wrong when wrapping the applications. >> > Your kind help is really appreciated and thanks a lot for the help so far. >> > >> > Thank You ! >> > >> > >> > >> > >> > >> > >> >> > > > > > -- > System Analyst Programmer > PTI Lab > Indiana University >
