If I am right, the grouping of related information together is not yet
available in cTAKES out of the box.
Also to generate output in a structured format, you can make use of HTMLWriter.
For more detailed info on this, you can check out Sean’s response for “Output
formats - CPE - cTAKES - Persist in
From: ama...@acolade.co.in [mailto:ama...@acolade.co.in]
Sent: Monday, March 12, 2018 4:09 PM
Subject: RE: Query on ctakes [EXTERNAL]
Please find the attachment of input and output text of ctakes.
From the ctakes output we can't identify which one is drug, disease, labtest
(for example : tocilizumab is a drug, but the output text may not specify what
Also, is there a way where we can group related information together? (e.g:-
For each drug, identify the dosage/ root of administration/dosage strength/
Dosage Frequency etc?)
How can we generate above expected output in a structured format? (HTML/JSON
Thanks & Regards
--------- Original Message ---------
Subject: Re: Query on ctakes [EXTERNAL]
From: "Finan, Sean"
Date: 3/9/18 7:46 pm
Could you please provide a full example sentence with expected vs. produced
output? ctakes isn't perfect but something like "fever" should be tagged.
Sent: Friday, March 9, 2018 12:59 AM
Subject: Query on ctakes [EXTERNAL]
Hello, Am a newbie to cTakes.
So far I am able to complete user installation and able to generate the
I am finding the extracted data NOT getting tagged with relevant
concepts(contexts) like Drugs, Disease. Lab results etc...which is a real
Would appreciate if somebody could help me to achieve tagging of the extracted
(e:g:- Fever to be tagged as Problem/Disease and abdominopelvic CT as Test(lab
Thanks & Regards
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