Lewis John McGibbney created JOSHUA-312:
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Summary: Alignment is never cached
Key: JOSHUA-312
URL: https://issues.apache.org/jira/browse/JOSHUA-312
Project: Joshua
Issue Type: Improvement
Components: alignment
Affects Versions: 6.0.5
Reporter: Lewis John McGibbney
Priority: Critical
Fix For: 6.2
Say if a pipeline fails after alignment. The alignment result is never cached
and it becomes necessary to undertake alignment... again!
We should investigate the process for caching alignments as it would really
speed up rerunning end-to-end pipelines for large input datasets.
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