Hi Dhruv,

> It would be interesting to see how the current implementation can be
> integrated into your Bioinformatics course work, what extensions you
> need for this particular domain.

I assume your HMM would be for the purpose of protein/nucleic acid sequence 
analysis and alignment. HMMs/MDPs are fairly domain-independent, but this would 
definitely be an interesting pursuit; I'm a grad student in comp bio, and I 
know a lot of folks who would love to use this. 

On the topic of GSoC, I meant to mention: I'm happy to volunteer my services as 
a potential mentor for the summer. 

Shannon

Apologies for the brevity, this was sent from my iPhone

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