My machine file is: miriel025*24 miriel026*24
Le 13/04/2017 à 16:46, Cyril Bordage a écrit : > There is the output: > ############################################################################## > [devel11:80858] [[2965,0],0] rmaps:base set policy with NULL device NONNULL > [devel11:80858] mca:rmaps:select: checking available component mindist > [devel11:80858] mca:rmaps:select: Querying component [mindist] > [devel11:80858] mca:rmaps:select: checking available component ppr > [devel11:80858] mca:rmaps:select: Querying component [ppr] > [devel11:80858] mca:rmaps:select: checking available component rank_file > [devel11:80858] mca:rmaps:select: Querying component [rank_file] > [devel11:80858] mca:rmaps:select: checking available component resilient > [devel11:80858] mca:rmaps:select: Querying component [resilient] > [devel11:80858] mca:rmaps:select: checking available component round_robin > [devel11:80858] mca:rmaps:select: Querying component [round_robin] > [devel11:80858] mca:rmaps:select: checking available component seq > [devel11:80858] mca:rmaps:select: Querying component [seq] > [devel11:80858] [[2965,0],0]: Final mapper priorities > [devel11:80858] Mapper: ppr Priority: 90 > [devel11:80858] Mapper: seq Priority: 60 > [devel11:80858] Mapper: resilient Priority: 40 > [devel11:80858] Mapper: mindist Priority: 20 > [devel11:80858] Mapper: round_robin Priority: 10 > [devel11:80858] Mapper: rank_file Priority: 0 > [devel11:80858] mca:rmaps: mapping job [2965,1] > [devel11:80858] mca:rmaps: setting mapping policies for job [2965,1] > nprocs 48 > [devel11:80858] mca:rmaps[169] mapping not set by user - using bynuma > [devel11:80858] mca:rmaps:ppr: job [2965,1] not using ppr mapper PPR > NULL policy PPR NOTSET > [devel11:80858] [[2965,0],0] rmaps:seq called on job [2965,1] > [devel11:80858] mca:rmaps:seq: job [2965,1] not using seq mapper > [devel11:80858] mca:rmaps:resilient: cannot perform initial map of job > [2965,1] - no fault groups > [devel11:80858] mca:rmaps:mindist: job [2965,1] not using mindist mapper > [devel11:80858] mca:rmaps:rr: mapping job [2965,1] > [devel11:80858] [[2965,0],0] Starting with 2 nodes in list > [devel11:80858] [[2965,0],0] Filtering thru apps > [devel11:80858] [[2965,0],0] Retained 2 nodes in list > [devel11:80858] [[2965,0],0] node miriel025 has 24 slots available > [devel11:80858] [[2965,0],0] node miriel026 has 24 slots available > [devel11:80858] AVAILABLE NODES FOR MAPPING: > [devel11:80858] node: miriel025 daemon: 1 > [devel11:80858] node: miriel026 daemon: 2 > [devel11:80858] [[2965,0],0] Starting bookmark at node miriel025 > [devel11:80858] [[2965,0],0] Starting at node miriel025 > [devel11:80858] mca:rmaps:rr: mapping no-span by NUMANode for job > [2965,1] slots 48 num_procs 48 > [devel11:80858] mca:rmaps:rr: found 4 NUMANode objects on node miriel025 > [devel11:80858] mca:rmaps:rr: calculated nprocs 24 > [devel11:80858] mca:rmaps:rr: assigning nprocs 24 > [devel11:80858] mca:rmaps:rr: found 4 NUMANode objects on node miriel026 > [devel11:80858] mca:rmaps:rr: calculated nprocs 24 > [devel11:80858] mca:rmaps:rr: assigning nprocs 24 > [devel11:80858] mca:rmaps:base: computing vpids by slot for job [2965,1] > [devel11:80858] mca:rmaps:base: assigning rank 0 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 1 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 2 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 3 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 4 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 5 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 6 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 7 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 8 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 9 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 10 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 11 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 12 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 13 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 14 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 15 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 16 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 17 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 18 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 19 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 20 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 21 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 22 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 23 to node miriel025 > [devel11:80858] mca:rmaps:base: assigning rank 24 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 25 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 26 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 27 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 28 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 29 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 30 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 31 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 32 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 33 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 34 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 35 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 36 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 37 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 38 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 39 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 40 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 41 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 42 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 43 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 44 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 45 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 46 to node miriel026 > [devel11:80858] mca:rmaps:base: assigning rank 47 to node miriel026 > [devel11:80858] [[2965,0],0] rmaps:base:compute_usage > [devel11:80858] mca:rmaps: compute bindings for job [2965,1] with policy > CORE[4008] > [devel11:80858] [[2965,0],0] bind_depth: 6 map_depth 2 > [devel11:80858] mca:rmaps: bind downward for job [2965,1] with bindings CORE > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],0] BITMAP 0 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],0][miriel025] TO > socket 0[core 0[hwt 0]]: [B/././././././././././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],1] BITMAP 12 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],1][miriel025] TO > socket 0[core 6[hwt 0]]: [././././././B/././././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],2] BITMAP 1 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],2][miriel025] TO > socket 1[core 12[hwt 0]]: [./././././././././././.][B/././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],3] BITMAP 13 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],3][miriel025] TO > socket 1[core 18[hwt 0]]: [./././././././././././.][././././././B/././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],4] BITMAP 2 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],4][miriel025] TO > socket 0[core 1[hwt 0]]: [./B/./././././././././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],5] BITMAP 14 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],5][miriel025] TO > socket 0[core 7[hwt 0]]: [./././././././B/./././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],6] BITMAP 3 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],6][miriel025] TO > socket 1[core 13[hwt 0]]: [./././././././././././.][./B/./././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],7] BITMAP 15 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],7][miriel025] TO > socket 1[core 19[hwt 0]]: [./././././././././././.][./././././././B/./././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],8] BITMAP 4 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],8][miriel025] TO > socket 0[core 2[hwt 0]]: [././B/././././././././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],9] BITMAP 16 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],9][miriel025] TO > socket 0[core 8[hwt 0]]: [././././././././B/././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],10] BITMAP 5 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],10][miriel025] TO > socket 1[core 14[hwt 0]]: [./././././././././././.][././B/././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],11] BITMAP 17 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],11][miriel025] TO > socket 1[core 20[hwt 0]]: [./././././././././././.][././././././././B/././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],12] BITMAP 6 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],12][miriel025] TO > socket 0[core 3[hwt 0]]: [./././B/./././././././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],13] BITMAP 18 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],13][miriel025] TO > socket 0[core 9[hwt 0]]: [./././././././././B/./.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],14] BITMAP 7 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],14][miriel025] TO > socket 1[core 15[hwt 0]]: [./././././././././././.][./././B/./././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],15] BITMAP 19 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],15][miriel025] TO > socket 1[core 21[hwt 0]]: [./././././././././././.][./././././././././B/./.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],16] BITMAP 8 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],16][miriel025] TO > socket 0[core 4[hwt 0]]: [././././B/././././././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],17] BITMAP 20 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],17][miriel025] TO > socket 0[core 10[hwt 0]]: [././././././././././B/.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],18] BITMAP 9 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],18][miriel025] TO > socket 1[core 16[hwt 0]]: [./././././././././././.][././././B/././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],19] BITMAP 21 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],19][miriel025] TO > socket 1[core 22[hwt 0]]: [./././././././././././.][././././././././././B/.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],20] BITMAP 10 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],20][miriel025] TO > socket 0[core 5[hwt 0]]: [./././././B/./././././.][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],21] BITMAP 22 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],21][miriel025] TO > socket 0[core 11[hwt 0]]: [./././././././././././B][./././././././././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],22] BITMAP 11 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],22][miriel025] TO > socket 1[core 17[hwt 0]]: [./././././././././././.][./././././B/./././././.] > [devel11:80858] [[2965,0],0] GOT 1 CPUS > [devel11:80858] [[2965,0],0] PROC [[2965,1],23] BITMAP 23 > [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],23][miriel025] TO > socket 1[core 23[hwt 0]]: [./././././././././././.][./././././././././././B] > [miriel025:60980] MCW rank 11 not bound > [miriel025:60990] MCW rank 21 not bound > [miriel025:60981] MCW rank 12 not bound > [miriel025:60979] MCW rank 10 not bound > [miriel025:60977] MCW rank 8 not bound > [miriel025:60970] MCW rank 1 not bound > [miriel025:60972] MCW rank 3 not bound > [miriel025:60984] MCW rank 15 not bound > [miriel026:163985] MCW rank 34 not bound > [miriel026:163993] MCW rank 42 not bound > [miriel026:163981] MCW rank 30 not bound > [miriel026:163983] MCW rank 32 not bound > [miriel025:60975] MCW rank 6 not bound > [miriel025:60986] MCW rank 17 not bound > [miriel025:60992] MCW rank 23 not bound > [miriel025:60973] MCW rank 4 not bound > [miriel025:60978] MCW rank 9 not bound > [miriel025:60969] MCW rank 0 not bound > [miriel025:60991] MCW rank 22 not bound > [miriel025:60974] MCW rank 5 not bound > [miriel025:60982] MCW rank 13 not bound > [miriel025:60989] MCW rank 20 not bound > [miriel025:60988] MCW rank 19 not bound > [miriel025:60983] MCW rank 14 not bound > [miriel025:60987] MCW rank 18 not bound > [miriel025:60976] MCW rank 7 not bound > [miriel026:163996] MCW rank 45 not bound > [miriel026:163979] MCW rank 28 not bound > [miriel026:163990] MCW rank 39 not bound > [miriel026:163976] MCW rank 25 not bound > [miriel026:163997] MCW rank 46 not bound > [miriel025:60971] MCW rank 2 not bound > [miriel026:163995] MCW rank 44 not bound > [miriel026:163987] MCW rank 36 not bound > [miriel026:163982] MCW rank 31 not bound > [miriel025:60985] MCW rank 16 not bound > [miriel026:163980] MCW rank 29 not bound > [miriel026:163975] MCW rank 24 not bound > [miriel026:163978] MCW rank 27 not bound > [miriel026:163992] MCW rank 41 not bound > [miriel026:163991] MCW rank 40 not bound > [miriel026:163998] MCW rank 47 not bound > [miriel026:163986] MCW rank 35 not bound > [miriel026:163984] MCW rank 33 not bound > [miriel026:163989] MCW rank 38 not bound > [miriel026:163994] MCW rank 43 not bound > [miriel026:163988] MCW rank 37 not bound > [miriel026:163977] MCW rank 26 not bound > ############################################################################## > > Le 13/04/2017 à 16:31, r...@open-mpi.org a écrit : >> Try adding "-mca rmaps_base_verbose 5” and see what that output tells us - I >> assume you have a debug build configured, yes (i.e., added --enable-debug to >> configure line)? >> >> >>> On Apr 13, 2017, at 7:28 AM, Cyril Bordage <cyril.bord...@inria.fr> wrote: >>> >>> When I run this command from the compute node I have also that. But not >>> when I run it from a login node (with the same machine file). >>> >>> >>> Cyril. >>> >>> Le 13/04/2017 à 16:22, r...@open-mpi.org a écrit : >>>> We are asking all these questions because we cannot replicate your problem >>>> - so we are trying to help you figure out what is different or missing >>>> from your machine. When I run your cmd line on my system, I get: >>>> >>>> [rhc002.cluster:55965] MCW rank 24 bound to socket 0[core 0[hwt 0-1]]: >>>> [BB/../../../../../../../../../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 25 bound to socket 1[core 12[hwt 0-1]]: >>>> [../../../../../../../../../../../..][BB/../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 26 bound to socket 0[core 1[hwt 0-1]]: >>>> [../BB/../../../../../../../../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 27 bound to socket 1[core 13[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../BB/../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 28 bound to socket 0[core 2[hwt 0-1]]: >>>> [../../BB/../../../../../../../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 29 bound to socket 1[core 14[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../BB/../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 30 bound to socket 0[core 3[hwt 0-1]]: >>>> [../../../BB/../../../../../../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 31 bound to socket 1[core 15[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../BB/../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 32 bound to socket 0[core 4[hwt 0-1]]: >>>> [../../../../BB/../../../../../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 33 bound to socket 1[core 16[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../BB/../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 34 bound to socket 0[core 5[hwt 0-1]]: >>>> [../../../../../BB/../../../../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 35 bound to socket 1[core 17[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../BB/../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 36 bound to socket 0[core 6[hwt 0-1]]: >>>> [../../../../../../BB/../../../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 37 bound to socket 1[core 18[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../BB/../../../../..] >>>> [rhc002.cluster:55965] MCW rank 38 bound to socket 0[core 7[hwt 0-1]]: >>>> [../../../../../../../BB/../../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 39 bound to socket 1[core 19[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../BB/../../../..] >>>> [rhc002.cluster:55965] MCW rank 40 bound to socket 0[core 8[hwt 0-1]]: >>>> [../../../../../../../../BB/../../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 41 bound to socket 1[core 20[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../../BB/../../..] >>>> [rhc002.cluster:55965] MCW rank 42 bound to socket 0[core 9[hwt 0-1]]: >>>> [../../../../../../../../../BB/../..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 43 bound to socket 1[core 21[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../../../BB/../..] >>>> [rhc002.cluster:55965] MCW rank 44 bound to socket 0[core 10[hwt 0-1]]: >>>> [../../../../../../../../../../BB/..][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 45 bound to socket 1[core 22[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../../../../BB/..] >>>> [rhc002.cluster:55965] MCW rank 46 bound to socket 0[core 11[hwt 0-1]]: >>>> [../../../../../../../../../../../BB][../../../../../../../../../../../..] >>>> [rhc002.cluster:55965] MCW rank 47 bound to socket 1[core 23[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../../../../../BB] >>>> [rhc001:197743] MCW rank 0 bound to socket 0[core 0[hwt 0-1]]: >>>> [BB/../../../../../../../../../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 1 bound to socket 1[core 12[hwt 0-1]]: >>>> [../../../../../../../../../../../..][BB/../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 2 bound to socket 0[core 1[hwt 0-1]]: >>>> [../BB/../../../../../../../../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 3 bound to socket 1[core 13[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../BB/../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 4 bound to socket 0[core 2[hwt 0-1]]: >>>> [../../BB/../../../../../../../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 5 bound to socket 1[core 14[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../BB/../../../../../../../../..] >>>> [rhc001:197743] MCW rank 6 bound to socket 0[core 3[hwt 0-1]]: >>>> [../../../BB/../../../../../../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 7 bound to socket 1[core 15[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../BB/../../../../../../../..] >>>> [rhc001:197743] MCW rank 8 bound to socket 0[core 4[hwt 0-1]]: >>>> [../../../../BB/../../../../../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 9 bound to socket 1[core 16[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../BB/../../../../../../..] >>>> [rhc001:197743] MCW rank 10 bound to socket 0[core 5[hwt 0-1]]: >>>> [../../../../../BB/../../../../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 11 bound to socket 1[core 17[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../BB/../../../../../..] >>>> [rhc001:197743] MCW rank 12 bound to socket 0[core 6[hwt 0-1]]: >>>> [../../../../../../BB/../../../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 13 bound to socket 1[core 18[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../BB/../../../../..] >>>> [rhc001:197743] MCW rank 14 bound to socket 0[core 7[hwt 0-1]]: >>>> [../../../../../../../BB/../../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 15 bound to socket 1[core 19[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../BB/../../../..] >>>> [rhc001:197743] MCW rank 16 bound to socket 0[core 8[hwt 0-1]]: >>>> [../../../../../../../../BB/../../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 17 bound to socket 1[core 20[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../../BB/../../..] >>>> [rhc001:197743] MCW rank 18 bound to socket 0[core 9[hwt 0-1]]: >>>> [../../../../../../../../../BB/../..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 19 bound to socket 1[core 21[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../../../BB/../..] >>>> [rhc001:197743] MCW rank 20 bound to socket 0[core 10[hwt 0-1]]: >>>> [../../../../../../../../../../BB/..][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 21 bound to socket 1[core 22[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../../../../BB/..] >>>> [rhc001:197743] MCW rank 22 bound to socket 0[core 11[hwt 0-1]]: >>>> [../../../../../../../../../../../BB][../../../../../../../../../../../..] >>>> [rhc001:197743] MCW rank 23 bound to socket 1[core 23[hwt 0-1]]: >>>> [../../../../../../../../../../../..][../../../../../../../../../../../BB] >>>> >>>> Exactly as expected. You might check that you have libnuma and >>>> libnuma-devel installed >>>> >>>> >>>>> On Apr 13, 2017, at 6:50 AM, gil...@rist.or.jp wrote: >>>>> >>>>> OK thanks, >>>>> >>>>> we've had some issues in the past when Open MPI assumed that the (login) >>>>> node running mpirun has the same topology than the other (compute) nodes. >>>>> i just wanted to clear this scenario. >>>>> >>>>> Cheers, >>>>> >>>>> Gilles >>>>> >>>>> ----- Original Message ----- >>>>>> I am using the 6886c12 commit. >>>>>> I have no particular option for the configuration. >>>>>> I launch my application in the same way as I presented in my firt >>>>> email, >>>>>> there is the exact line: mpirun -np 48 -machinefile mf -bind-to core >>>>>> -report-bindings ./a.out >>>>>> >>>>>> lstopo does give the same output on both types on nodes. What is the >>>>>> purpose of that? >>>>>> >>>>>> Thanks. >>>>>> >>>>>> >>>>>> Cyril. >>>>>> >>>>>> Le 13/04/2017 à 15:24, gil...@rist.or.jp a écrit : >>>>>>> Also, can you please run >>>>>>> lstopo >>>>>>> on both your login and compute nodes ? >>>>>>> >>>>>>> Cheers, >>>>>>> >>>>>>> Gilles >>>>>>> >>>>>>> >>>>>>> ----- Original Message ----- >>>>>>>> Can you be a bit more specific? >>>>>>>> >>>>>>>> - What version of Open MPI are you using? >>>>>>>> - How did you configure Open MPI? >>>>>>>> - How are you launching Open MPI applications? >>>>>>>> >>>>>>>> >>>>>>>>> On Apr 13, 2017, at 9:08 AM, Cyril Bordage <cyril.bord...@inria.fr >>>>>> >>>>>>> wrote: >>>>>>>>> >>>>>>>>> Hi, >>>>>>>>> >>>>>>>>> now this bug happens also when I launch my mpirun command from the >>>>>>>>> compute node. >>>>>>>>> >>>>>>>>> >>>>>>>>> Cyril. >>>>>>>>> >>>>>>>>> Le 06/04/2017 à 05:38, r...@open-mpi.org a écrit : >>>>>>>>>> I believe this has been fixed now - please let me know >>>>>>>>>> >>>>>>>>>>> On Mar 30, 2017, at 1:57 AM, Cyril Bordage <cyril.bordage@inria. >>>>> fr >>>>>>>> wrote: >>>>>>>>>>> >>>>>>>>>>> Hello, >>>>>>>>>>> >>>>>>>>>>> I am using the git version of MPI with "-bind-to core -report- >>>>>>> bindings" >>>>>>>>>>> and I get that for all processes: >>>>>>>>>>> [miriel010:160662] MCW rank 0 not bound >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> When I use an old version I get: >>>>>>>>>>> [miriel010:44921] MCW rank 0 bound to socket 0[core 0[hwt 0]]: >>>>>>>>>>> [B/././././././././././.][./././././././././././.] >>>>>>>>>>> >>>>>>>>>>> From git bisect the culprit seems to be: 48fc339 >>>>>>>>>>> >>>>>>>>>>> This bug happends only when I launch my mpirun command from a >>>>>>> login node >>>>>>>>>>> and not >>>>>>>>>>> from a compute node. >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> Cyril. >>>>>>>>>>> _______________________________________________ >>>>>>>>>>> devel mailing list >>>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>>> >>>>>>>>>> _______________________________________________ >>>>>>>>>> devel mailing list >>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>>> >>>>>>>>> _______________________________________________ >>>>>>>>> devel mailing list >>>>>>>>> devel@lists.open-mpi.org >>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>> >>>>>>>> >>>>>>>> -- >>>>>>>> Jeff Squyres >>>>>>>> jsquy...@cisco.com >>>>>>>> >>>>>>>> _______________________________________________ >>>>>>>> devel mailing list >>>>>>>> devel@lists.open-mpi.org >>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>> _______________________________________________ >>>>>>> devel mailing list >>>>>>> devel@lists.open-mpi.org >>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>> >>>>>> _______________________________________________ >>>>>> devel mailing list >>>>>> devel@lists.open-mpi.org >>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>> >>>>> _______________________________________________ >>>>> devel mailing list >>>>> devel@lists.open-mpi.org >>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>> >>>> _______________________________________________ >>>> devel mailing list >>>> devel@lists.open-mpi.org >>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>> >>> _______________________________________________ >>> devel mailing list >>> devel@lists.open-mpi.org >>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >> >> _______________________________________________ >> devel mailing list >> devel@lists.open-mpi.org >> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >> _______________________________________________ devel mailing list devel@lists.open-mpi.org https://rfd.newmexicoconsortium.org/mailman/listinfo/devel
