All right, let’s replace rmaps_base_verbose with odls_base_verbose and see what that saids
> On Apr 13, 2017, at 8:34 AM, Cyril Bordage <cyril.bord...@inria.fr> wrote: > > '-report-bindings' does that. > I used this option because the ranks did not seem to be binded (if I use > a rank file the performace is far better). > > Le 13/04/2017 à 17:24, r...@open-mpi.org a écrit : >> Okay, so as far as OMPI is concerned, it correctly bound everyone! So how >> are you generating this output claiming it isn’t bound? >> >>> On Apr 13, 2017, at 7:57 AM, Cyril Bordage <cyril.bord...@inria.fr> wrote: >>> >>> devel11:17550] [[29888,0],0] rmaps:base set policy with NULL device NONNULL >>> [devel11:17550] mca:rmaps:select: checking available component mindist >>> [devel11:17550] mca:rmaps:select: Querying component [mindist] >>> [devel11:17550] mca:rmaps:select: checking available component ppr >>> [devel11:17550] mca:rmaps:select: Querying component [ppr] >>> [devel11:17550] mca:rmaps:select: checking available component rank_file >>> [devel11:17550] mca:rmaps:select: Querying component [rank_file] >>> [devel11:17550] mca:rmaps:select: checking available component resilient >>> [devel11:17550] mca:rmaps:select: Querying component [resilient] >>> [devel11:17550] mca:rmaps:select: checking available component round_robin >>> [devel11:17550] mca:rmaps:select: Querying component [round_robin] >>> [devel11:17550] mca:rmaps:select: checking available component seq >>> [devel11:17550] mca:rmaps:select: Querying component [seq] >>> [devel11:17550] [[29888,0],0]: Final mapper priorities >>> [devel11:17550] Mapper: ppr Priority: 90 >>> [devel11:17550] Mapper: seq Priority: 60 >>> [devel11:17550] Mapper: resilient Priority: 40 >>> [devel11:17550] Mapper: mindist Priority: 20 >>> [devel11:17550] Mapper: round_robin Priority: 10 >>> [devel11:17550] Mapper: rank_file Priority: 0 >>> [miriel025:62329] [[29888,0],1] rmaps:base set policy with NULL device >>> NONNULL >>> [miriel025:62329] mca:rmaps:select: checking available component mindist >>> [miriel025:62329] mca:rmaps:select: Querying component [mindist] >>> [miriel025:62329] mca:rmaps:select: checking available component ppr >>> [miriel025:62329] mca:rmaps:select: Querying component [ppr] >>> [miriel025:62329] mca:rmaps:select: checking available component rank_file >>> [miriel025:62329] mca:rmaps:select: Querying component [rank_file] >>> [miriel026:165125] [[29888,0],2] rmaps:base set policy with NULL device >>> NONNULL >>> [miriel026:165125] mca:rmaps:select: checking available component mindist >>> [miriel026:165125] mca:rmaps:select: Querying component [mindist] >>> [miriel026:165125] mca:rmaps:select: checking available component ppr >>> [miriel026:165125] mca:rmaps:select: Querying component [ppr] >>> [miriel026:165125] mca:rmaps:select: checking available component rank_file >>> [miriel026:165125] mca:rmaps:select: Querying component [rank_file] >>> [miriel026:165125] mca:rmaps:select: checking available component resilient >>> [miriel026:165125] mca:rmaps:select: Querying component [resilient] >>> [miriel026:165125] mca:rmaps:select: checking available component >>> round_robin >>> [miriel026:165125] mca:rmaps:select: Querying component [round_robin] >>> [miriel026:165125] mca:rmaps:select: checking available component seq >>> [miriel026:165125] mca:rmaps:select: Querying component [seq] >>> [miriel026:165125] [[29888,0],2]: Final mapper priorities >>> [miriel026:165125] Mapper: ppr Priority: 90 >>> [[devel11:17550] mca:rmaps: mapping job [29888,1] >>> [devel11:17550] mca:rmaps: setting mapping policies for job [29888,1] >>> nprocs 48 >>> [devel11:17550] mca:rmaps[169] mapping not set by user - using bynuma >>> [devel11:17550] mca:rmaps:ppr: job [29888,1] not using ppr mapper PPR >>> NULL policy PPR NOTSET >>> [devel11:17550] [[29888,0],0] rmaps:seq called on job [29888,1] >>> [devel11:17550] mca:rmaps:seq: job [29888,1] not using seq mapper >>> [devel11:17550] mca:rmaps:resilient: cannot perform initial map of job >>> [29888,1] - no fault groups >>> [devel11:17550] mca:rmaps:mindist: job [29888,1] not using mindist mapper >>> [devel11:17550] mca:rmaps:rr: mapping job [29888,1] >>> [devel11:17550] [[29888,0],0] Starting with 2 nodes in list >>> [devel11:17550] [[29888,0],0] Filtering thru apps >>> [miriel025:62329] mca:rmaps:select: checking available component resilient >>> [miriel025:62329] mca:rmaps:select: Querying component [resilient] >>> [miriel025:62329] mca:rmaps:select: checking available component round_robin >>> [miriel025:62329] mca:rmaps:select: Querying component [round_robin] >>> [miriel025:62329] mca:rmaps:select: checking available component seq >>> [miriel025:62329] mca:rmaps:select: Querying component [seq] >>> [miriel025:62329] [[29888,0],1]: Final mapper priorities >>> [miriel025:62329] Mapper: ppr Priority: 90 >>> [miriel025:62329] Mapper: seq Priority: 60 >>> [miriel025:62329] Mapper: resilient Priority: 40 >>> [miriel025:62329] Mapper: mindist Priority: 20 >>> [miriel025:62329] Mapper: round_robin Priority: 10 >>> [miriel025:62329] Mapper: rank_file Priority: 0 >>> [miriel025:62329] mca:rmaps: mapping job [29888,1] >>> [miriel025:62329] mca:rmaps: setting mapping policies for job [29888,1] >>> nprocs 48 >>> [miriel025:62329] mca:rmaps[169] mapping not set by user - using bynuma >>> [miriel025:62329] mca:rmaps:ppr: job [29888,1] not using ppr mapper PPR >>> NULL policy PPR NOTSET >>> [miriel025:62329] [[29888,0],1] rmaps:seq called on job [29888,1] >>> [miriel025:62329] mca:rmaps:seq: job [29888,1] not using seq mapper >>> [miriel025:62329] mca:rmaps:resilient: cannot perform initial map of job >>> [29888,1] - no fault groups >>> [miriel025:62329] mca:rmaps:mindist: job [29888,1] not using mindist mapper >>> [miriel025:62329] mca:rmaps:rr: mapping job [29888,1] >>> [miriel025:62329] [[29888,0],1] Starting with 2 nodes in list >>> [miriel025:62329] [[29888,0],1] Filtering thru apps >>> [devel11:17550] [[29888,0],0] Retained 2 nodes in list >>> [devel11:17550] [[29888,0],0] node miriel025 has 24 slots available >>> [devel11:17550] [[29888,0],0] node miriel026 has 24 slots available >>> [devel11:17550] AVAILABLE NODES FOR MAPPING: >>> [devel11:17550] node: miriel025 daemon: 1 >>> [devel11:17550] node: miriel026 daemon: 2 >>> [devel11:17550] [[29888,0],0] Starting bookmark at node miriel025 >>> [devel11:17550] [[29888,0],0] Starting at node miriel025 >>> [devel11:17550] mca:rmaps:rr: mapping no-span by NUMANode for job >>> [29888,1] slots 48 num_procs 48 >>> [devel11:17550] mca:rmaps:rr: found 4 NUMANode objects on node miriel025 >>> [devel11:17550] mca:rmaps:rr: calculated nprocs 24 >>> [devel11:17550] mca:rmaps:rr: assigning nprocs 24 >>> [devel11:17550] mca:rmaps:rr: found 4 NUMANode objects on node miriel026 >>> [devel11:17550] mca:rmaps:rr: calculated nprocs 24 >>> [devel11:17550] mca:rmaps:rr: assigning nprocs 24 >>> [devel11:17550] mca:rmaps:base: computing vpids by slot for job [29888,1] >>> [devel11:17550] mca:rmaps:base: assigning rank 0 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 1 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 2 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 3 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 4 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 5 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 6 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 7 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 8 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 9 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 10 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 11 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 12 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 13 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 14 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 15 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 16 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 17 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 18 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 19 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 20 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 21 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 22 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 23 to node miriel025 >>> [devel11:17550] mca:rmaps:base: assigning rank 24 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 25 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 26 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 27 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 28 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 29 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 30 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 31 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 32 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 33 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 34 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 35 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 36 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 37 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 38 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 39 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 40 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 41 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 42 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 43 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 44 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 45 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 46 to node miriel026 >>> [devel11:17550] mca:rmaps:base: assigning rank 47 to node miriel026 >>> [devel11:17550] [[29888,0],0] rmaps:base:compute_usage >>> [devel11:17550] mca:rmaps: compute bindings for job [29888,1] with >>> policy CORE[4008] >>> [devel11:17550] [[29888,0],0] bind_depth: 6 map_depth 2 >>> [devel11:17550] mca:rmaps: bind downward for job [29888,1] with bindings >>> CORE >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],0] BITMAP 0 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],0][miriel025] TO >>> socket 0[core 0[hwt 0]]: [B/././././././././././.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],1] BITMAP 12 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],1][miriel025] TO >>> socket 0[core 6[hwt 0]]: [././././././B/././././.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],2] BITMAP 1 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],2][miriel025] TO >>> socket 1[core 12[hwt 0]]: [./././././././././././.][B/././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],3] BITMAP 13 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],3][miriel025] TO >>> socket 1[core 18[hwt 0]]: [./././././././././././.][././././././B/././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],4] BITMAP 2 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],4][miriel025] TO >>> socket 0[core 1[hwt 0]]: [./B/./././././././././.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],5] BITMAP 14 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],5][miriel025] TO >>> socket 0[core 7[hwt 0]]: [./././././././B/./././.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],6] BITMAP 3 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],6][miriel025] TO >>> socket 1[core 13[hwt 0]]: [./././././././././././.][./B/./././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],7] BITMAP 15 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],7][miriel025] TO >>> socket 1[core 19[hwt 0]]: [./././././././././././.][./././././././B/./././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],8] BITMAP 4 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],8][miriel025] TO >>> socket 0[core 2[hwt 0]]: [././B/././././././././.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],9] BITMAP 16 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],9][miriel025] TO >>> socket 0[core 8[hwt 0]]: [././././././././B/././.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],10] BITMAP 5 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],10][miriel025] TO >>> socket 1[core 14[hwt 0]]: [./././././././././././.][././B/././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],11] BITMAP 17 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],11][miriel025] TO >>> socket 1[core 20[hwt 0]]: [./././././././././././.][././././././././B/././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],12] BITMAP 6 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],12][miriel025] TO >>> socket 0[core 3[hwt 0]]: [./././B/./././././././.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],13] BITMAP 18 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],13][miriel025] TO >>> socket 0[core 9[hwt 0]]: [./././././././././B/./.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],14] BITMAP 7 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],14][miriel025] TO >>> socket 1[core 15[hwt 0]]: [./././././././././././.][./././B/./././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],15] BITMAP 19 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],15][miriel025] TO >>> socket 1[core 21[hwt 0]]: [./././././././././././.][./././././././././B/./.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],16] BITMAP 8 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],16][miriel025] TO >>> socket 0[core 4[hwt 0]]: [././././B/././././././.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],17] BITMAP 20 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],17][miriel025] TO >>> socket 0[core 10[hwt 0]]: [././././././././././B/.][./././././././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],18] BITMAP 9 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],18][miriel025] TO >>> socket 1[core 16[hwt 0]]: [./././././././././././.][././././B/././././././.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],19] BITMAP 21 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],19][miriel025] TO >>> socket 1[core 22[hwt 0]]: [./././././././././././.][././././././././././B/.] >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],20] BITMAP 10 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],20][miriel025] TO >>> socket 0[core 5[hwt 0]]: [./././././B/./././././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] Retained 2 nodes in list >>> [miriel025:62329] [[29888,0],1] node miriel025 has 24 slots available >>> [miriel025:62329] [[29888,0],1] node miriel026 has 24 slots available >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [miriel025:62329] AVAILABLE NODES FOR MAPPING: >>> [miriel025:62329] node: miriel025 daemon: 1 >>> [miriel025:62329] node: miriel026 daemon: 2 >>> [miriel025:62329] [[29888,0],1] Starting bookmark at node miriel025 >>> [miriel025:62329] [[29888,0],1] Starting at node miriel025 >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],21] BITMAP 22 >>> [miriel025:62329] mca:rmaps:rr: mapping no-span by NUMANode for job >>> [29888,1] slots 48 num_procs 48 >>> [miriel025:62329] mca:rmaps:rr: found 4 NUMANode objects on node miriel025 >>> [miriel025:62329] mca:rmaps:rr: calculated nprocs 24 >>> [miriel025:62329] mca:rmaps:rr: assigning nprocs 24 >>> [miriel025:62329] mca:rmaps:rr: found 4 NUMANode objects on node miriel026 >>> [miriel025:62329] mca:rmaps:rr: calculated nprocs 24 >>> [miriel025:62329] mca:rmaps:rr: assigning nprocs 24 >>> [miriel025:62329] mca:rmaps:base: computing vpids by slot for job [29888,1] >>> [miriel025:62329] mca:rmaps:base: assigning rank 0 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 1 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 2 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 3 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 4 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 5 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 6 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 7 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 8 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 9 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 10 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 11 to node miriel025 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],21][miriel025] TO >>> socket 0[core 11[hwt 0]]: [./././././././././././B][./././././././././././.] >>> [miriel025:62329] mca:rmaps:base: assigning rank 12 to node miriel025 >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [miriel025:62329] mca:rmaps:base: assigning rank 13 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 14 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 15 to node miriel025 >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],22] BITMAP 11 >>> [miriel025:62329] mca:rmaps:base: assigning rank 16 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 17 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 18 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 19 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 20 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 21 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 22 to node miriel025 >>> [miriel025:62329] mca:rmaps:base: assigning rank 23 to node miriel025 >>> miriel026:165125] Mapper: seq Priority: 60 >>> [miriel026:165125] Mapper: resilient Priority: 40 >>> [miriel026:165125] Mapper: mindist Priority: 20 >>> [miriel026:165125] Mapper: round_robin Priority: 10 >>> [miriel026:165125] Mapper: rank_file Priority: 0 >>> [miriel025:62329] mca:rmaps:base: assigning rank 24 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 25 to node miriel026 >>> [miriel026:165125] mca:rmaps: mapping job [29888,1] >>> [miriel026:165125] mca:rmaps: setting mapping policies for job [29888,1] >>> nprocs 48 >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],22][miriel025] TO >>> socket 1[core 17[hwt 0]]: [./././././././././././.][./././././B/./././././.] >>> [miriel026:165125] mca:rmaps[169] mapping not set by user - using bynuma >>> [miriel026:165125] mca:rmaps:ppr: job [29888,1] not using ppr mapper PPR >>> NULL policy PPR NOTSET >>> [devel11:17550] [[29888,0],0] GOT 1 CPUS >>> [miriel026:165125] [[29888,0],2] rmaps:seq called on job [29888,1] >>> [miriel026:165125] mca:rmaps:seq: job [29888,1] not using seq mapper >>> [devel11:17550] [[29888,0],0] PROC [[29888,1],23] BITMAP 23 >>> [miriel025:62329] mca:rmaps:base: assigning rank 26 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 27 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 28 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 29 to node miriel026 >>> [miriel026:165125] mca:rmaps:resilient: cannot perform initial map of >>> job [29888,1] - no fault groups >>> [miriel026:165125] mca:rmaps:mindist: job [29888,1] not using mindist mapper >>> [miriel025:62329] mca:rmaps:base: assigning rank 30 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 31 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 32 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 33 to node miriel026 >>> [miriel026:165125] mca:rmaps:rr: mapping job [29888,1] >>> [miriel026:165125] [[29888,0],2] Starting with 2 nodes in list >>> [miriel025:62329] mca:rmaps:base: assigning rank 34 to node miriel026 >>> [miriel026:165125] [[29888,0],2] Filtering thru apps >>> [devel11:17550] [[29888,0],0] BOUND PROC [[29888,1],23][miriel025] TO >>> socket 1[core 23[hwt 0]]: [./././././././././././.][./././././././././././B] >>> [miriel025:62329] mca:rmaps:base: assigning rank 35 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 36 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 37 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 38 to node miriel026 >>> [miriel026:165125] [[29888,0],2] Retained 2 nodes in list >>> [miriel026:165125] [[29888,0],2] node miriel025 has 24 slots available >>> [miriel026:165125] [[29888,0],2] node miriel026 has 24 slots available >>> [miriel026:165125] AVAILABLE NODES FOR MAPPING: >>> [miriel026:165125] node: miriel025 daemon: 1 >>> [miriel026:165125] node: miriel026 daemon: 2 >>> [miriel026:165125] [[29888,0],2] Starting bookmark at node miriel025 >>> [miriel026:165125] [[29888,0],2] Starting at node miriel025 >>> [miriel026:165125] mca:rmaps:rr: mapping no-span by NUMANode for job >>> [29888,1] slots 48 num_procs 48 >>> [miriel026:165125] mca:rmaps:rr: found 4 NUMANode objects on node miriel025 >>> [miriel026:165125] mca:rmaps:rr: calculated nprocs 24 >>> [miriel026:165125] mca:rmaps:rr: assigning nprocs 24 >>> [miriel026:165125] mca:rmaps:rr: found 4 NUMANode objects on node miriel026 >>> [miriel026:165125] mca:rmaps:rr: calculated nprocs 24 >>> [miriel026:165125] mca:rmaps:rr: assigning nprocs 24 >>> [miriel026:165125] mca:rmaps:base: computing vpids by slot for job [29888,1] >>> [miriel026:165125] mca:rmaps:base: assigning rank 0 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 1 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 2 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 3 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 4 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 5 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 6 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 7 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 8 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 9 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 10 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 11 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 12 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 13 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 14 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 15 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 16 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 17 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 18 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 19 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 20 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 21 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 22 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 23 to node miriel025 >>> [miriel026:165125] mca:rmaps:base: assigning rank 24 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 25 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 26 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 27 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 28 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 29 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 30 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 31 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 32 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 33 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 34 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 35 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 36 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 37 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 38 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 39 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 40 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 41 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 42 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 43 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 44 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 45 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 46 to node miriel026 >>> [miriel026:165125] mca:rmaps:base: assigning rank 47 to node miriel026 >>> [miriel026:165125] [[29888,0],2] rmaps:base:compute_usage >>> [miriel025:62329] mca:rmaps:base: assigning rank 39 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 40 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 41 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 42 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 43 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 44 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 45 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 46 to node miriel026 >>> [miriel025:62329] mca:rmaps:base: assigning rank 47 to node miriel026 >>> [miriel025:62329] [[29888,0],1] rmaps:base:compute_usage >>> [miriel025:62329] mca:rmaps: compute bindings for job [29888,1] with >>> policy CORE[4008] >>> [miriel025:62329] [[29888,0],1] bind_depth: 6 map_depth 2 >>> [miriel025:62329] mca:rmaps: bind downward for job [29888,1] with >>> bindings CORE >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],24] BITMAP 0 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],24][miriel026] TO >>> socket 0[core 0[hwt 0]]: [B/././././././././././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],25] BITMAP 12 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],25][miriel026] TO >>> socket 0[core 6[hwt 0]]: [././././././B/././././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],26] BITMAP 1 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],26][miriel026] TO >>> socket 1[core 12[hwt 0]]: [./././././././././././.][B/././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],27] BITMAP 13 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],27][miriel026] TO >>> socket 1[core 18[hwt 0]]: [./././././././././././.][././././././B/././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],28] BITMAP 2 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],28][miriel026] TO >>> socket 0[core 1[hwt 0]]: [./B/./././././././././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],29] BITMAP 14 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],29][miriel026] TO >>> socket 0[core 7[hwt 0]]: [./././././././B/./././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],30] BITMAP 3 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],30][miriel026] TO >>> socket 1[core 13[hwt 0]]: [./././././././././././.][./B/./././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],31] BITMAP 15 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],31][miriel026] TO >>> socket 1[core 19[hwt 0]]: [./././././././././././.][./././././././B/./././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],32] BITMAP 4 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],32][miriel026] TO >>> socket 0[core 2[hwt 0]]: [././B/././././././././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],33] BITMAP 16 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],33][miriel026] TO >>> socket 0[core 8[hwt 0]]: [././././././././B/././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],34] BITMAP 5 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],34][miriel026] TO >>> socket 1[core 14[hwt 0]]: [./././././././././././.][././B/././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],35] BITMAP 17 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],35][miriel026] TO >>> socket 1[core 20[hwt 0]]: [./././././././././././.][././././././././B/././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],36] BITMAP 6 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],36][miriel026] TO >>> socket 0[core 3[hwt 0]]: [./././B/./././././././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],37] BITMAP 18 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],37][miriel026] TO >>> socket 0[core 9[hwt 0]]: [./././././././././B/./.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],38] BITMAP 7 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],38][miriel026] TO >>> socket 1[core 15[hwt 0]]: [./././././././././././.][./././B/./././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],39] BITMAP 19 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],39][miriel026] TO >>> socket 1[core 21[hwt 0]]: [./././././././././././.][./././././././././B/./.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],40] BITMAP 8 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],40][miriel026] TO >>> socket 0[core 4[hwt 0]]: [././././B/././././././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],41] BITMAP 20 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],41][miriel026] TO >>> socket 0[core 10[hwt 0]]: [././././././././././B/.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],42] BITMAP 9 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],42][miriel026] TO >>> socket 1[core 16[hwt 0]]: [./././././././././././.][././././B/././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],43] BITMAP 21 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],43][miriel026] TO >>> socket 1[core 22[hwt 0]]: [./././././././././././.][././././././././././B/.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],44] BITMAP 10 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],44][miriel026] TO >>> socket 0[core 5[hwt 0]]: [./././././B/./././././.][./././././././././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],45] BITMAP 22 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],45][miriel026] TO >>> socket 0[core 11[hwt 0]]: [./././././././././././B][./././././././././././.] >>> [miriel026:165125] mca:rmaps: compute bindings for job [29888,1] with >>> policy CORE[4008] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],46] BITMAP 11 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],46][miriel026] TO >>> socket 1[core 17[hwt 0]]: [./././././././././././.][./././././B/./././././.] >>> [miriel025:62329] [[29888,0],1] GOT 1 CPUS >>> [miriel025:62329] [[29888,0],1] PROC [[29888,1],47] BITMAP 23 >>> [miriel025:62329] [[29888,0],1] BOUND PROC [[29888,1],47][miriel026] TO >>> socket 1[core 23[hwt 0]]: [./././././././././././.][./././././././././././B] >>> [miriel025:62342] MCW rank 0 not bound >>> [miriel026:165138] MCW rank 24 not bound >>> [miriel025:62343] MCW rank 1 not bound >>> [miriel026:165139] MCW rank 25 not bound >>> [miriel025:62344] MCW rank 2 not bound >>> [miriel026:165140] MCW rank 26 not bound >>> [miriel025:62345] MCW rank 3 not bound >>> [miriel026:165141] MCW rank 27 not bound >>> [miriel025:62346] MCW rank 4 not bound >>> [miriel026:165142] MCW rank 28 not bound >>> [miriel025:62348] MCW rank 5 not bound >>> [miriel026:165144] MCW rank 29 not bound >>> [miriel025:62350] MCW rank 6 not bound >>> [miriel026:165146] MCW rank 30 not bound >>> [miriel025:62352] MCW rank 7 not bound >>> [miriel025:62354] MCW rank 8 not bound >>> [miriel026:165148] MCW rank 31 not bound >>> [miriel025:62356] MCW rank 9 not bound >>> [miriel025:62358] MCW rank 10 not bound >>> [miriel026:165150] MCW rank 32 not bound >>> [miriel026:165152] MCW rank 33 not bound >>> [miriel026:165154] MCW rank 34 not bound >>> [miriel025:62360] MCW rank 11 not bound >>> [miriel026:165156] MCW rank 35 not bound >>> [miriel025:62362] MCW rank 12 not bound >>> [miriel026:165158] MCW rank 36 not bound >>> [miriel025:62366] MCW rank 14 not bound >>> [miriel025:62364] MCW rank 13 not bound >>> [miriel026:165160] MCW rank 37 not bound >>> [miriel025:62368] MCW rank 15 not bound >>> [miriel026:165163] MCW rank 39 not bound >>> [miriel025:62370] MCW rank 16 not bound >>> [miriel026:165166] MCW rank 40 not bound >>> [miriel026:165167] MCW rank 41 not bound >>> [miriel026:165162] MCW rank 38 not bound >>> [miriel025:62372] MCW rank 17 not bound >>> [miriel025:62374] MCW rank 18 not bound >>> [miriel026:165170] MCW rank 42 not bound >>> [miriel025:62376] MCW rank 19 not bound >>> [miriel026:165171] MCW rank 43 not bound >>> [miriel025:62377] MCW rank 20 not bound >>> [miriel026:165173] MCW rank 44 not bound >>> [miriel025:62380] MCW rank 21 not bound >>> [miriel025:62381] MCW rank 22 not bound >>> [miriel026:165177] MCW rank 46 not bound >>> [miriel026:165175] MCW rank 45 not bound >>> [miriel026:165179] MCW rank 47 not bound >>> [miriel025:62384] MCW rank 23 not bound >>> >>> >>> Le 13/04/2017 à 16:52, r...@open-mpi.org a écrit : >>>> Okay, so you login node was able to figure out all the bindings. I don’t >>>> see any debug output from your compute nodes, which is suspicious. >>>> >>>> Try adding --leave-session-attached to the cmd line and let’s see if we >>>> can capture the compute node daemon’s output >>>> >>>>> On Apr 13, 2017, at 7:48 AM, Cyril Bordage <cyril.bord...@inria.fr> wrote: >>>>> >>>>> My machine file is: miriel025*24 miriel026*24 >>>>> >>>>> Le 13/04/2017 à 16:46, Cyril Bordage a écrit : >>>>>> There is the output: >>>>>> ############################################################################## >>>>>> [devel11:80858] [[2965,0],0] rmaps:base set policy with NULL device >>>>>> NONNULL >>>>>> [devel11:80858] mca:rmaps:select: checking available component mindist >>>>>> [devel11:80858] mca:rmaps:select: Querying component [mindist] >>>>>> [devel11:80858] mca:rmaps:select: checking available component ppr >>>>>> [devel11:80858] mca:rmaps:select: Querying component [ppr] >>>>>> [devel11:80858] mca:rmaps:select: checking available component rank_file >>>>>> [devel11:80858] mca:rmaps:select: Querying component [rank_file] >>>>>> [devel11:80858] mca:rmaps:select: checking available component resilient >>>>>> [devel11:80858] mca:rmaps:select: Querying component [resilient] >>>>>> [devel11:80858] mca:rmaps:select: checking available component >>>>>> round_robin >>>>>> [devel11:80858] mca:rmaps:select: Querying component [round_robin] >>>>>> [devel11:80858] mca:rmaps:select: checking available component seq >>>>>> [devel11:80858] mca:rmaps:select: Querying component [seq] >>>>>> [devel11:80858] [[2965,0],0]: Final mapper priorities >>>>>> [devel11:80858] Mapper: ppr Priority: 90 >>>>>> [devel11:80858] Mapper: seq Priority: 60 >>>>>> [devel11:80858] Mapper: resilient Priority: 40 >>>>>> [devel11:80858] Mapper: mindist Priority: 20 >>>>>> [devel11:80858] Mapper: round_robin Priority: 10 >>>>>> [devel11:80858] Mapper: rank_file Priority: 0 >>>>>> [devel11:80858] mca:rmaps: mapping job [2965,1] >>>>>> [devel11:80858] mca:rmaps: setting mapping policies for job [2965,1] >>>>>> nprocs 48 >>>>>> [devel11:80858] mca:rmaps[169] mapping not set by user - using bynuma >>>>>> [devel11:80858] mca:rmaps:ppr: job [2965,1] not using ppr mapper PPR >>>>>> NULL policy PPR NOTSET >>>>>> [devel11:80858] [[2965,0],0] rmaps:seq called on job [2965,1] >>>>>> [devel11:80858] mca:rmaps:seq: job [2965,1] not using seq mapper >>>>>> [devel11:80858] mca:rmaps:resilient: cannot perform initial map of job >>>>>> [2965,1] - no fault groups >>>>>> [devel11:80858] mca:rmaps:mindist: job [2965,1] not using mindist mapper >>>>>> [devel11:80858] mca:rmaps:rr: mapping job [2965,1] >>>>>> [devel11:80858] [[2965,0],0] Starting with 2 nodes in list >>>>>> [devel11:80858] [[2965,0],0] Filtering thru apps >>>>>> [devel11:80858] [[2965,0],0] Retained 2 nodes in list >>>>>> [devel11:80858] [[2965,0],0] node miriel025 has 24 slots available >>>>>> [devel11:80858] [[2965,0],0] node miriel026 has 24 slots available >>>>>> [devel11:80858] AVAILABLE NODES FOR MAPPING: >>>>>> [devel11:80858] node: miriel025 daemon: 1 >>>>>> [devel11:80858] node: miriel026 daemon: 2 >>>>>> [devel11:80858] [[2965,0],0] Starting bookmark at node miriel025 >>>>>> [devel11:80858] [[2965,0],0] Starting at node miriel025 >>>>>> [devel11:80858] mca:rmaps:rr: mapping no-span by NUMANode for job >>>>>> [2965,1] slots 48 num_procs 48 >>>>>> [devel11:80858] mca:rmaps:rr: found 4 NUMANode objects on node miriel025 >>>>>> [devel11:80858] mca:rmaps:rr: calculated nprocs 24 >>>>>> [devel11:80858] mca:rmaps:rr: assigning nprocs 24 >>>>>> [devel11:80858] mca:rmaps:rr: found 4 NUMANode objects on node miriel026 >>>>>> [devel11:80858] mca:rmaps:rr: calculated nprocs 24 >>>>>> [devel11:80858] mca:rmaps:rr: assigning nprocs 24 >>>>>> [devel11:80858] mca:rmaps:base: computing vpids by slot for job [2965,1] >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 0 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 1 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 2 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 3 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 4 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 5 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 6 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 7 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 8 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 9 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 10 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 11 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 12 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 13 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 14 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 15 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 16 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 17 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 18 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 19 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 20 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 21 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 22 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 23 to node miriel025 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 24 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 25 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 26 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 27 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 28 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 29 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 30 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 31 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 32 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 33 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 34 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 35 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 36 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 37 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 38 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 39 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 40 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 41 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 42 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 43 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 44 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 45 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 46 to node miriel026 >>>>>> [devel11:80858] mca:rmaps:base: assigning rank 47 to node miriel026 >>>>>> [devel11:80858] [[2965,0],0] rmaps:base:compute_usage >>>>>> [devel11:80858] mca:rmaps: compute bindings for job [2965,1] with policy >>>>>> CORE[4008] >>>>>> [devel11:80858] [[2965,0],0] bind_depth: 6 map_depth 2 >>>>>> [devel11:80858] mca:rmaps: bind downward for job [2965,1] with bindings >>>>>> CORE >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],0] BITMAP 0 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],0][miriel025] TO >>>>>> socket 0[core 0[hwt 0]]: >>>>>> [B/././././././././././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],1] BITMAP 12 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],1][miriel025] TO >>>>>> socket 0[core 6[hwt 0]]: >>>>>> [././././././B/././././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],2] BITMAP 1 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],2][miriel025] TO >>>>>> socket 1[core 12[hwt 0]]: >>>>>> [./././././././././././.][B/././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],3] BITMAP 13 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],3][miriel025] TO >>>>>> socket 1[core 18[hwt 0]]: >>>>>> [./././././././././././.][././././././B/././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],4] BITMAP 2 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],4][miriel025] TO >>>>>> socket 0[core 1[hwt 0]]: >>>>>> [./B/./././././././././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],5] BITMAP 14 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],5][miriel025] TO >>>>>> socket 0[core 7[hwt 0]]: >>>>>> [./././././././B/./././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],6] BITMAP 3 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],6][miriel025] TO >>>>>> socket 1[core 13[hwt 0]]: >>>>>> [./././././././././././.][./B/./././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],7] BITMAP 15 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],7][miriel025] TO >>>>>> socket 1[core 19[hwt 0]]: >>>>>> [./././././././././././.][./././././././B/./././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],8] BITMAP 4 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],8][miriel025] TO >>>>>> socket 0[core 2[hwt 0]]: >>>>>> [././B/././././././././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],9] BITMAP 16 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],9][miriel025] TO >>>>>> socket 0[core 8[hwt 0]]: >>>>>> [././././././././B/././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],10] BITMAP 5 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],10][miriel025] TO >>>>>> socket 1[core 14[hwt 0]]: >>>>>> [./././././././././././.][././B/././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],11] BITMAP 17 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],11][miriel025] TO >>>>>> socket 1[core 20[hwt 0]]: >>>>>> [./././././././././././.][././././././././B/././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],12] BITMAP 6 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],12][miriel025] TO >>>>>> socket 0[core 3[hwt 0]]: >>>>>> [./././B/./././././././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],13] BITMAP 18 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],13][miriel025] TO >>>>>> socket 0[core 9[hwt 0]]: >>>>>> [./././././././././B/./.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],14] BITMAP 7 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],14][miriel025] TO >>>>>> socket 1[core 15[hwt 0]]: >>>>>> [./././././././././././.][./././B/./././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],15] BITMAP 19 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],15][miriel025] TO >>>>>> socket 1[core 21[hwt 0]]: >>>>>> [./././././././././././.][./././././././././B/./.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],16] BITMAP 8 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],16][miriel025] TO >>>>>> socket 0[core 4[hwt 0]]: >>>>>> [././././B/././././././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],17] BITMAP 20 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],17][miriel025] TO >>>>>> socket 0[core 10[hwt 0]]: >>>>>> [././././././././././B/.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],18] BITMAP 9 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],18][miriel025] TO >>>>>> socket 1[core 16[hwt 0]]: >>>>>> [./././././././././././.][././././B/././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],19] BITMAP 21 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],19][miriel025] TO >>>>>> socket 1[core 22[hwt 0]]: >>>>>> [./././././././././././.][././././././././././B/.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],20] BITMAP 10 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],20][miriel025] TO >>>>>> socket 0[core 5[hwt 0]]: >>>>>> [./././././B/./././././.][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],21] BITMAP 22 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],21][miriel025] TO >>>>>> socket 0[core 11[hwt 0]]: >>>>>> [./././././././././././B][./././././././././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],22] BITMAP 11 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],22][miriel025] TO >>>>>> socket 1[core 17[hwt 0]]: >>>>>> [./././././././././././.][./././././B/./././././.] >>>>>> [devel11:80858] [[2965,0],0] GOT 1 CPUS >>>>>> [devel11:80858] [[2965,0],0] PROC [[2965,1],23] BITMAP 23 >>>>>> [devel11:80858] [[2965,0],0] BOUND PROC [[2965,1],23][miriel025] TO >>>>>> socket 1[core 23[hwt 0]]: >>>>>> [./././././././././././.][./././././././././././B] >>>>>> [miriel025:60980] MCW rank 11 not bound >>>>>> [miriel025:60990] MCW rank 21 not bound >>>>>> [miriel025:60981] MCW rank 12 not bound >>>>>> [miriel025:60979] MCW rank 10 not bound >>>>>> [miriel025:60977] MCW rank 8 not bound >>>>>> [miriel025:60970] MCW rank 1 not bound >>>>>> [miriel025:60972] MCW rank 3 not bound >>>>>> [miriel025:60984] MCW rank 15 not bound >>>>>> [miriel026:163985] MCW rank 34 not bound >>>>>> [miriel026:163993] MCW rank 42 not bound >>>>>> [miriel026:163981] MCW rank 30 not bound >>>>>> [miriel026:163983] MCW rank 32 not bound >>>>>> [miriel025:60975] MCW rank 6 not bound >>>>>> [miriel025:60986] MCW rank 17 not bound >>>>>> [miriel025:60992] MCW rank 23 not bound >>>>>> [miriel025:60973] MCW rank 4 not bound >>>>>> [miriel025:60978] MCW rank 9 not bound >>>>>> [miriel025:60969] MCW rank 0 not bound >>>>>> [miriel025:60991] MCW rank 22 not bound >>>>>> [miriel025:60974] MCW rank 5 not bound >>>>>> [miriel025:60982] MCW rank 13 not bound >>>>>> [miriel025:60989] MCW rank 20 not bound >>>>>> [miriel025:60988] MCW rank 19 not bound >>>>>> [miriel025:60983] MCW rank 14 not bound >>>>>> [miriel025:60987] MCW rank 18 not bound >>>>>> [miriel025:60976] MCW rank 7 not bound >>>>>> [miriel026:163996] MCW rank 45 not bound >>>>>> [miriel026:163979] MCW rank 28 not bound >>>>>> [miriel026:163990] MCW rank 39 not bound >>>>>> [miriel026:163976] MCW rank 25 not bound >>>>>> [miriel026:163997] MCW rank 46 not bound >>>>>> [miriel025:60971] MCW rank 2 not bound >>>>>> [miriel026:163995] MCW rank 44 not bound >>>>>> [miriel026:163987] MCW rank 36 not bound >>>>>> [miriel026:163982] MCW rank 31 not bound >>>>>> [miriel025:60985] MCW rank 16 not bound >>>>>> [miriel026:163980] MCW rank 29 not bound >>>>>> [miriel026:163975] MCW rank 24 not bound >>>>>> [miriel026:163978] MCW rank 27 not bound >>>>>> [miriel026:163992] MCW rank 41 not bound >>>>>> [miriel026:163991] MCW rank 40 not bound >>>>>> [miriel026:163998] MCW rank 47 not bound >>>>>> [miriel026:163986] MCW rank 35 not bound >>>>>> [miriel026:163984] MCW rank 33 not bound >>>>>> [miriel026:163989] MCW rank 38 not bound >>>>>> [miriel026:163994] MCW rank 43 not bound >>>>>> [miriel026:163988] MCW rank 37 not bound >>>>>> [miriel026:163977] MCW rank 26 not bound >>>>>> ############################################################################## >>>>>> >>>>>> Le 13/04/2017 à 16:31, r...@open-mpi.org a écrit : >>>>>>> Try adding "-mca rmaps_base_verbose 5” and see what that output tells >>>>>>> us - I assume you have a debug build configured, yes (i.e., added >>>>>>> --enable-debug to configure line)? >>>>>>> >>>>>>> >>>>>>>> On Apr 13, 2017, at 7:28 AM, Cyril Bordage <cyril.bord...@inria.fr> >>>>>>>> wrote: >>>>>>>> >>>>>>>> When I run this command from the compute node I have also that. But not >>>>>>>> when I run it from a login node (with the same machine file). >>>>>>>> >>>>>>>> >>>>>>>> Cyril. >>>>>>>> >>>>>>>> Le 13/04/2017 à 16:22, r...@open-mpi.org a écrit : >>>>>>>>> We are asking all these questions because we cannot replicate your >>>>>>>>> problem - so we are trying to help you figure out what is different >>>>>>>>> or missing from your machine. When I run your cmd line on my system, >>>>>>>>> I get: >>>>>>>>> >>>>>>>>> [rhc002.cluster:55965] MCW rank 24 bound to socket 0[core 0[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [BB/../../../../../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 25 bound to socket 1[core 12[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][BB/../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 26 bound to socket 0[core 1[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../BB/../../../../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 27 bound to socket 1[core 13[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../BB/../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 28 bound to socket 0[core 2[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../BB/../../../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 29 bound to socket 1[core 14[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../BB/../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 30 bound to socket 0[core 3[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../BB/../../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 31 bound to socket 1[core 15[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../BB/../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 32 bound to socket 0[core 4[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../BB/../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 33 bound to socket 1[core 16[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../BB/../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 34 bound to socket 0[core 5[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../BB/../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 35 bound to socket 1[core 17[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../BB/../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 36 bound to socket 0[core 6[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../BB/../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 37 bound to socket 1[core 18[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../BB/../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 38 bound to socket 0[core 7[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../BB/../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 39 bound to socket 1[core 19[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../BB/../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 40 bound to socket 0[core 8[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../BB/../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 41 bound to socket 1[core 20[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../../BB/../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 42 bound to socket 0[core 9[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../BB/../..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 43 bound to socket 1[core 21[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../../../BB/../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 44 bound to socket 0[core 10[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../BB/..][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 45 bound to socket 1[core 22[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../../../../BB/..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 46 bound to socket 0[core 11[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../BB][../../../../../../../../../../../..] >>>>>>>>> [rhc002.cluster:55965] MCW rank 47 bound to socket 1[core 23[hwt >>>>>>>>> 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../../../../../BB] >>>>>>>>> [rhc001:197743] MCW rank 0 bound to socket 0[core 0[hwt 0-1]]: >>>>>>>>> [BB/../../../../../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 1 bound to socket 1[core 12[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][BB/../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 2 bound to socket 0[core 1[hwt 0-1]]: >>>>>>>>> [../BB/../../../../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 3 bound to socket 1[core 13[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../BB/../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 4 bound to socket 0[core 2[hwt 0-1]]: >>>>>>>>> [../../BB/../../../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 5 bound to socket 1[core 14[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../BB/../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 6 bound to socket 0[core 3[hwt 0-1]]: >>>>>>>>> [../../../BB/../../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 7 bound to socket 1[core 15[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../BB/../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 8 bound to socket 0[core 4[hwt 0-1]]: >>>>>>>>> [../../../../BB/../../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 9 bound to socket 1[core 16[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../BB/../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 10 bound to socket 0[core 5[hwt 0-1]]: >>>>>>>>> [../../../../../BB/../../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 11 bound to socket 1[core 17[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../BB/../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 12 bound to socket 0[core 6[hwt 0-1]]: >>>>>>>>> [../../../../../../BB/../../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 13 bound to socket 1[core 18[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../BB/../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 14 bound to socket 0[core 7[hwt 0-1]]: >>>>>>>>> [../../../../../../../BB/../../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 15 bound to socket 1[core 19[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../BB/../../../..] >>>>>>>>> [rhc001:197743] MCW rank 16 bound to socket 0[core 8[hwt 0-1]]: >>>>>>>>> [../../../../../../../../BB/../../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 17 bound to socket 1[core 20[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../../BB/../../..] >>>>>>>>> [rhc001:197743] MCW rank 18 bound to socket 0[core 9[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../BB/../..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 19 bound to socket 1[core 21[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../../../BB/../..] >>>>>>>>> [rhc001:197743] MCW rank 20 bound to socket 0[core 10[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../BB/..][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 21 bound to socket 1[core 22[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../../../../BB/..] >>>>>>>>> [rhc001:197743] MCW rank 22 bound to socket 0[core 11[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../BB][../../../../../../../../../../../..] >>>>>>>>> [rhc001:197743] MCW rank 23 bound to socket 1[core 23[hwt 0-1]]: >>>>>>>>> [../../../../../../../../../../../..][../../../../../../../../../../../BB] >>>>>>>>> >>>>>>>>> Exactly as expected. You might check that you have libnuma and >>>>>>>>> libnuma-devel installed >>>>>>>>> >>>>>>>>> >>>>>>>>>> On Apr 13, 2017, at 6:50 AM, gil...@rist.or.jp wrote: >>>>>>>>>> >>>>>>>>>> OK thanks, >>>>>>>>>> >>>>>>>>>> we've had some issues in the past when Open MPI assumed that the >>>>>>>>>> (login) >>>>>>>>>> node running mpirun has the same topology than the other (compute) >>>>>>>>>> nodes. >>>>>>>>>> i just wanted to clear this scenario. >>>>>>>>>> >>>>>>>>>> Cheers, >>>>>>>>>> >>>>>>>>>> Gilles >>>>>>>>>> >>>>>>>>>> ----- Original Message ----- >>>>>>>>>>> I am using the 6886c12 commit. >>>>>>>>>>> I have no particular option for the configuration. >>>>>>>>>>> I launch my application in the same way as I presented in my firt >>>>>>>>>> email, >>>>>>>>>>> there is the exact line: mpirun -np 48 -machinefile mf -bind-to core >>>>>>>>>>> -report-bindings ./a.out >>>>>>>>>>> >>>>>>>>>>> lstopo does give the same output on both types on nodes. What is the >>>>>>>>>>> purpose of that? >>>>>>>>>>> >>>>>>>>>>> Thanks. >>>>>>>>>>> >>>>>>>>>>> >>>>>>>>>>> Cyril. >>>>>>>>>>> >>>>>>>>>>> Le 13/04/2017 à 15:24, gil...@rist.or.jp a écrit : >>>>>>>>>>>> Also, can you please run >>>>>>>>>>>> lstopo >>>>>>>>>>>> on both your login and compute nodes ? >>>>>>>>>>>> >>>>>>>>>>>> Cheers, >>>>>>>>>>>> >>>>>>>>>>>> Gilles >>>>>>>>>>>> >>>>>>>>>>>> >>>>>>>>>>>> ----- Original Message ----- >>>>>>>>>>>>> Can you be a bit more specific? >>>>>>>>>>>>> >>>>>>>>>>>>> - What version of Open MPI are you using? >>>>>>>>>>>>> - How did you configure Open MPI? >>>>>>>>>>>>> - How are you launching Open MPI applications? >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>>> On Apr 13, 2017, at 9:08 AM, Cyril Bordage >>>>>>>>>>>>>> <cyril.bord...@inria.fr >>>>>>>>>>> >>>>>>>>>>>> wrote: >>>>>>>>>>>>>> >>>>>>>>>>>>>> Hi, >>>>>>>>>>>>>> >>>>>>>>>>>>>> now this bug happens also when I launch my mpirun command from >>>>>>>>>>>>>> the >>>>>>>>>>>>>> compute node. >>>>>>>>>>>>>> >>>>>>>>>>>>>> >>>>>>>>>>>>>> Cyril. >>>>>>>>>>>>>> >>>>>>>>>>>>>> Le 06/04/2017 à 05:38, r...@open-mpi.org a écrit : >>>>>>>>>>>>>>> I believe this has been fixed now - please let me know >>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> On Mar 30, 2017, at 1:57 AM, Cyril Bordage >>>>>>>>>>>>>>>> <cyril.bordage@inria. >>>>>>>>>> fr >>>>>>>>>>>>> wrote: >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> Hello, >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> I am using the git version of MPI with "-bind-to core -report- >>>>>>>>>>>> bindings" >>>>>>>>>>>>>>>> and I get that for all processes: >>>>>>>>>>>>>>>> [miriel010:160662] MCW rank 0 not bound >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> When I use an old version I get: >>>>>>>>>>>>>>>> [miriel010:44921] MCW rank 0 bound to socket 0[core 0[hwt 0]]: >>>>>>>>>>>>>>>> [B/././././././././././.][./././././././././././.] >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> From git bisect the culprit seems to be: 48fc339 >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> This bug happends only when I launch my mpirun command from a >>>>>>>>>>>> login node >>>>>>>>>>>>>>>> and not >>>>>>>>>>>>>>>> from a compute node. >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> Cyril. >>>>>>>>>>>>>>>> _______________________________________________ >>>>>>>>>>>>>>>> devel mailing list >>>>>>>>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>>>>>>>> >>>>>>>>>>>>>>> _______________________________________________ >>>>>>>>>>>>>>> devel mailing list >>>>>>>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>>>>>>>> >>>>>>>>>>>>>> _______________________________________________ >>>>>>>>>>>>>> devel mailing list >>>>>>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>>>>>> >>>>>>>>>>>>> >>>>>>>>>>>>> -- >>>>>>>>>>>>> Jeff Squyres >>>>>>>>>>>>> jsquy...@cisco.com >>>>>>>>>>>>> >>>>>>>>>>>>> _______________________________________________ >>>>>>>>>>>>> devel mailing list >>>>>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>>>>> _______________________________________________ >>>>>>>>>>>> devel mailing list >>>>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>>>>> >>>>>>>>>>> _______________________________________________ >>>>>>>>>>> devel mailing list >>>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>>>> >>>>>>>>>> _______________________________________________ >>>>>>>>>> devel mailing list >>>>>>>>>> devel@lists.open-mpi.org >>>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>> >>>>>>>>> _______________________________________________ >>>>>>>>> devel mailing list >>>>>>>>> devel@lists.open-mpi.org >>>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>>>> >>>>>>>> _______________________________________________ >>>>>>>> devel mailing list >>>>>>>> devel@lists.open-mpi.org >>>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>> >>>>>>> _______________________________________________ >>>>>>> devel mailing list >>>>>>> devel@lists.open-mpi.org >>>>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>>>>> >>>>> _______________________________________________ >>>>> devel mailing list >>>>> devel@lists.open-mpi.org >>>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>> >>>> _______________________________________________ >>>> devel mailing list >>>> devel@lists.open-mpi.org >>>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >>>> >>> _______________________________________________ >>> devel mailing list >>> devel@lists.open-mpi.org >>> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >> >> _______________________________________________ >> devel mailing list >> devel@lists.open-mpi.org >> https://rfd.newmexicoconsortium.org/mailman/listinfo/devel >> > _______________________________________________ > devel mailing list > devel@lists.open-mpi.org > https://rfd.newmexicoconsortium.org/mailman/listinfo/devel _______________________________________________ devel mailing list devel@lists.open-mpi.org https://rfd.newmexicoconsortium.org/mailman/listinfo/devel
