Hi Jason,
I get an internal server error code: 500, after trying that. Here is the
response;
httr::content(r, "text")[1] "{\"httpStatus\":\"Internal Server
Error\",\"httpStatusCode\":500,\"status\":\"ERROR\",\"message\":\"Can
not instantiate value of type [simple type, class
org.hisp.dhis.organisationunit.OrganisationUnit] from String value
('It7fWcKbcZX'); no single-String constructor/factory method\\n at
[Source: org.apache.catalina.connector.CoyoteInputStream@1efec811;
line: 1, column: 73] (through reference chain:
org.hisp.dhis.organisationunit.OrganisationUnit[\\\"parent\\\"])\"}"
Thank you.
On Thu, Feb 15, 2018 at 10:36 AM, Jason Pickering <
jason.p.picker...@gmail.com> wrote:
> Hi Isiah,
>
> The reason for it not working (at least at first glance) is that you are
> posing to the /api/metadata endpoint. Thus, you need to tell the server
> what you are trying to import. In this case, its organisation units.
>
> I think changing this to
>
> r <- POST(url, authenticate(dest.user, dest.pass),
> body = toJSON(list(organisationUnits=new_org), auto_unbox =
> TRUE),
> content_type_json())
>
> should work.
>
> The example works because the file
> <https://raw.githubusercontent.com/jason-p-pickering/dhis2-data-munging/master/ous/ous.json>
> looks like this:
>
>
> {"created":"2016-08-10","organisationUnits":[{"id":"u6yjgvIMzKn",...
>
>
> Hope this helps and best regards,
>
> Jason
>
>
>
>
>
> On Thu, Feb 15, 2018 at 6:34 AM, Isaiah Nyabuto <isaiahnyab...@gmail.com>
> wrote:
>
>>
>> Dear Jason and Dhis2 Community,
>>
>> I am following your guide on bootstrapping
>> <https://github.com/jason-p-pickering/dhis2-data-munging/blob/master/bootstrap/bootstrap.Rmd>
>> dhis2 with R while trying to import metadata using the API.
>>
>> I do not understand why my metadata is not imported. Here are my steps,
>> any help will be appreciated.
>>
>>
>> head(org) name uid code parent
>> shortname
>> 1 Wikithuki Dispensary Bc371uxfYD5 16925 vpiZlB5cdK7 Wikithuki
>> Dispensary
>> 2 Gemifa Medical Clinic Z7Lf1n3Fcpi 22907 mEZBjj4fLBT
>> Gemifa
>> 3 Olympus Medical Clinic NAbQdHuaJFK 22906 PeEcMfBchbr
>> Olympus
>> 4 Masaba Community Health Unit tYwHeLSnHyb 600616 QR2K4k8VKF1
>> Masaba CHU
>> 5 Gatunga Health Centre cmay4WXRmhA 12034 IcAegRcGuV6 Gatunga Health
>> Centre
>> 6 Cfw Kimangaru Clinic E52UsoBxJVS 11966 vEAFtHnPDrX CFW Kimangaru
>> Clinic
>> description openingdate closedate comment featuretype
>> coordinates url
>> 1 NA NA POINT
>> [37.95263,-0.77819]
>> 2 Clinic NA NA NONE
>> [34.391914,0.059575]
>> 3 Clinic NA NA NONE
>> [34.3994,0.059575]
>> 4 Community Unit NA NA NONE
>> [34.46411,0.19358]
>> 5 NA NA POINT
>> [37.9423,-0.29656]
>> 6 NA NA POINT
>> [37.53009,-0.54506]
>> contactperson address email phonenumber
>> 1 NA NA NA NA
>> 2 NA NA NA NA
>> 3 NA NA NA NA
>> 4 NA NA NA NA
>> 5 NA NA NA NA
>> 6 NA NA NA NA
>>
>>
>> I followed the following steps to prepare my df for import.
>> 1. Removed all the NAs and columns with entire NAs.
>>
>> head(new_org) name uid code parent
>> shortname
>> 1 Wikithuki Dispensary Bc371uxfYD5 16925 vpiZlB5cdK7 Wikithuki
>> Dispensary
>> 2 Gemifa Medical Clinic Z7Lf1n3Fcpi 22907 mEZBjj4fLBT
>> Gemifa
>> 3 Olympus Medical Clinic NAbQdHuaJFK 22906 PeEcMfBchbr
>> Olympus
>> 4 Masaba Community Health Unit tYwHeLSnHyb 600616 QR2K4k8VKF1
>> Masaba CHU
>> 5 Gatunga Health Centre cmay4WXRmhA 12034 IcAegRcGuV6 Gatunga Health
>> Centre
>> 6 Cfw Kimangaru Clinic E52UsoBxJVS 11966 vEAFtHnPDrX CFW Kimangaru
>> Clinic
>> description comment featuretype coordinates url
>> 1 POINT [37.95263,-0.77819]
>> 2 Clinic NONE [34.391914,0.059575]
>> 3 Clinic NONE [34.3994,0.059575]
>> 4 Community Unit NONE [34.46411,0.19358]
>> 5 POINT [37.9423,-0.29656]
>> 6 POINT [37.53009,-0.54506]
>>
>>
>> 3. Then post the data as follows.
>>
>> dest.url <- "http://localhost/dhis/";
>> url <- paste0(dest.url, "api/metadata?importStrategy=C
>> REATE&atomicMode=NONE")
>> r <- POST(url, authenticate(dest.user, dest.pass),
>> body = toJSON(new_org, auto_unbox = TRUE),
>> content_type_json())
>> assertthat::assert_that(r$status_code==200)
>>
>> 4. The body looks like.
>>
>> jsonlite::toJSON(me, auto_unbox = TRUE)[{"name":"Wikithuki
>> Dispensary","uid":"Bc371uxfYD5","code":"16925","parent":"vpiZlB5cdK7","shortname":"Wikithuki
>>
>> Dispensary","description":"","comment":"","featuretype":"POINT","coordinates":"[37.95263,-0.77819]","url":""},{"name":"Gemifa
>> Medical
>> Clinic","uid":"Z7Lf1n3Fcpi","code":"22907","parent":"mEZBjj4fLBT","shortname":"Gemifa","description":"Clinic","comment":"","featuretype":"NONE","coordinates":"[34.391914,0.059575]","url":""},{"name":"Olympus
>> Medical
>> Clinic","uid":"NAbQdHuaJFK","code":"22906","parent":"PeEcMfBchbr","shortname":"Olympus","description":"Clinic","comment":"","featuretype":"NONE","coordinates":"[34.3994,0.059575]","url":""},{"name":"Masaba
>> Community Health
>> Unit","uid":"tYwHeLSnHyb","code":"600616","parent":"QR2K4k8VKF1","shortname":"Masaba
>> CHU","description":"Community
>> Unit","comment":"","featuretype":"NONE","coordinates":"[34.46411,0.19358]","url":""},{"name":"Gatunga
>> Health
>> Centre","uid":"cmay4WXRmhA","code":"12034","parent":"IcAegRcGuV6","shortname":"Gatunga
>> Health
>> Centre","description":"","comment":"","featuretype":"POINT","coordinates":"[37.9423,-0.29656]","url":""},{"name":"Cfw
>> Kimangaru
>> Clinic","uid":"E52UsoBxJVS","code":"11966","parent":"vEAFtHnPDrX","shortname":"CFW
>> Kimangaru
>> Clinic","description":"","comment":"","featuretype":"POINT","coordinates":"[37.53009,-0.54506]","url":""}]
>>
>>
>> What could be the problem there? I get status 200 and still it doesn't
>> import.
>>
>>
>> Thank you
>>
>>
>> --
>> ------------------------------------------------------------
>> --------------------
>> Isaiah Nyabuto
>> +254 729 572 616
>> Bsc. Health Records Management & Informatics, JKUAT.
>>
>
>
>
> --
> Jason P. Pickering
> email: jason.p.picker...@gmail.com
> tel:+46764147049
>
--
--------------------------------------------------------------------------------
Isaiah Nyabuto
+254 729 572 616
Bsc. Health Records Management & Informatics, JKUAT.
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