I am currently working on implementing a "wheel repack" command which
lets you unpack a wheel, modify it and then repack it again while
keeping the wheel RECORD consistent.
I think this is something that would solve your use case.

ke, 2018-05-30 kello 10:07 +0200, Michal Petrucha kirjoitti:
> Hello everyone,
> 
> I've been looking for a way to ensure that certain modules don't end
> up in a wheel, while the rest of the package they reside in does. If I
> only cared about sdist, I could add a MANIFEST.in, in which I'd
> exclude those specific files, however, unfortunately, MANIFEST.in has
> no effect on bdists (at least of the wheel kind).
> 
> The use case is that our application auto-generates a parser and lexer
> with ply, and that parser might not work with different versions of
> ply. Since we don't have a whole lot of control over what version
> users have installed in their environments, we'd like to generate
> those modules in the target environment.
> 
> I took a deep dive into distutils and setuptools, and as far as I can
> see, any Python modules residing inside a package listed in the
> packages argument to setup() are included in the distribution
> unconditionally. Searching this mailing list only reveals a short
> thread from nine years ago [1] without any solution...
> 
> For now, the easiest hacky solution for me is to add a couple of
> os.remove calls to setup.py, but I'm not a big fan of setup.py messing
> with the source tree.
> 
> And as a follow-up question, is there any post-installation hook that
> we could use to trigger regeneration of those files?
> 
> Any ideas?
> 
> Michal
> 
> 
> [1]: 
> https://mail.python.org/mm3/archives/list/distutils-sig@python.org/message/NB7NBE2IE7N4KZQZW7IWZ2XE4RQ7DTEG/
> 
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