On 12/14/2012 05:51, Jon S. Berndt wrote:
>
> I just started using doxygen v1.8.2 and have found that it works differently
> than previous versions

Which previous version were you using?  David Stacey's 1.8.0-1, or my 
1.7.4-1?  (I'm the previous Cygwin doxygen package maintainer.)

> there seems to be a bug that is well-known

Evidenced by...?

You say that like you think we should all know about it, but this is the 
first I've heard about it, and I'd maintained the Cygwin doxygen package 
for years before handing it off to David a few months ago.  Not that I 
was an especially diligent maintainer, but I'd think it would have 
appeared on my radar at least once during all that time.

Which version of Graphviz do you have installed?  I refer not to just 
the version *number*, but also to whether you built it yourself from 
source, installed Yaakov Selkowitz' unofficial package, or installed the 
native Windows version from the Graphviz site.

If you're using the native Windows version:

a) Is it in your PATH?  That is, if you type "dot" at the Cygwin command 
line, does it run?

b) What happens if you put its explicit path in for DOT_PATH in your 
Doxyfile?

c) Does the symptom change if you install Yaakov's package?  (...and 
change DOT_PATH, to make sure it runs instead, of course.)

P.S., Since the problem appears to be specific to the Cygwin doxygen 
package, it would have been better if you had posted this to the 
Cygwin-Apps mailing list instead.  David is supposed to be reading this 
list, but he might miss this message since the subject line doesn't give 
him a reason to read it.  If you'd posted something with "doxygen" in 
the subject line to Cygwin-Apps-L, though, you'd have a much better 
chance of getting his attention.  It was pure luck you got mine.

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