Well, I've just installed the latest doxygen, and the latest Graphviz and
have run doxygen again for my project which - as I have mentioned - was
working fine through the last part of 2012. I'm not 100% sure when it
stopped working. In any case, I am still getting the same problem that I
reported before, where doxygen runs fine and produces the expected html
files, dot is found and produces the expected dot files, BUT, I get this
error many times:

...
...
Running dot for graph 2224/2259
Running dot for graph 2225/2259
Error: dot: can't open
/home/jon/JSBSimCVSGit/JSBSim/documentation/html/inherit_graph_9.dot
Error: dot: can't open
/home/jon/JSBSimCVSGit/JSBSim/documentation/html/inherit_graph_10.dot
...
...

If I copy and paste the filenames above that "cannot be opened", and try to
list them, they are definitely there. It's just that no .png files are
produced corresponding to these files.

I'm using Cygwin under Windows Vista - as I have been for years - and have
had no problems generating the documentation before late last year.

I really need to upload the latest documentation for an open source project,
but can't get doxygen and dot to play together nicely any more. Is it
possible for me to manually run dot on the .dot files and get the correct
files output? Any suggestions on debugging this issue? Is there a way to get
more descriptive error messages out? Is this likely purely a dot problem,
and maybe I should be looking to that group for support? 

Thanks much!

Jon




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