1. don't  make comments which are starting with --! inside sequential
statements !
2. if you make some comments inside your vhdlflow example try this:

 PROC_TEST_FLOW : process (p_Clk)
  --# PROC_TEST_FLOW ... 
  --# p_Clk -> clock
  begin
 --# Reset all signals and variables to safe condition 
   if (reset = '1') then
      s_t_MpxState <= t_MpxIdle;
      v_DataTransaction  := '1';

    elsif (p_Clk'event and p_Clk = '1') then

  case s_t_MpxState is
  -----------------------------------------------------------------------
    when t_MpxIdle1 => 
                       s_t_MpxState <= t_MpxIdle2; --# S1
  -----------------------------------------------------------------------
    when t_MpxIdle2 => 
                       s_t_MpxState <= t_MpxIdle1; --# S2
  -----------------------------------------------------------------------
    when others     => s_t_MpxState <= t_MpxIdle1;

  end case;

    end if;

  end process PROC_TEST_FLOW;
  
  
end behavioral_test;

3. you can try  the \cond -- \endcond commands and PREPROCESSOR_ENABBLE=YES,
see docu.
4. there is still an open bug for processes. Try the next doxygen update. 



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