Dear Bernd,
Attached please find a txt. file with the console messages after running the installation script. Regards, María. ________________________________ De: Bernd Flemisch <[email protected]> Enviado: lunes, 16 de julio de 2018 10:28:20 Para: DuMuX User Forum; Maria Bonto Asunto: Re: [DuMuX] Error while installing dumux Hi Maria, can you please also post the console output that you get from the install script or from running dunecontrol directly? Kind regards Bernd On 07/16/2018 10:13 AM, Maria Bonto wrote: Dear Sir/Madam, I was trying to install dumux on a Mac OS X 10.10 for the dumux course but I get the following error: failed to build the dune libraries. I am attaching the error log file I get. Thank you in advance. Best regards, María. _______________________________________________ Dumux mailing list [email protected]<mailto:[email protected]> https://listserv.uni-stuttgart.de/mailman/listinfo/dumux -- _______________________________________________________________ Bernd Flemisch phone: +49 711 685 69162 IWS, Universität Stuttgart fax: +49 711 685 60430 Pfaffenwaldring 61 email: [email protected]<mailto:[email protected]> D-70569 Stuttgart url: www.hydrosys.uni-stuttgart.de<http://www.hydrosys.uni-stuttgart.de> _______________________________________________________________
********************************************************************************************* Sucessfully created a folder dumux. ********************************************************************************************* ********************************************************************************************* (0/2) Downloading supplementary files. Make sure to be connected to the internet. ********************************************************************************************* --2018-07-16 09:57:26-- https://git.iws.uni-stuttgart.de/dumux-repositories/dumux-course/raw/master/scripts/test_dumux.sh Resolviendo git.iws.uni-stuttgart.de (git.iws.uni-stuttgart.de)... 129.69.98.181, 2001:7c0:2012:62::a2a2:181 Conectando con git.iws.uni-stuttgart.de (git.iws.uni-stuttgart.de)[129.69.98.181]:443... conectado. Petición HTTP enviada, esperando respuesta... 200 OK Longitud: 384 [text/plain] Grabando a: âtest_dumux.shâ test_dumux.sh 100%[===================>] 384 --.-KB/s en 0s 2018-07-16 09:57:27 (26,2 MB/s) - âtest_dumux.shâ guardado [384/384] --2018-07-16 09:57:27-- https://git.iws.uni-stuttgart.de/dumux-repositories/dumux-course/raw/master/cmake.opts Resolviendo git.iws.uni-stuttgart.de (git.iws.uni-stuttgart.de)... 129.69.98.181, 2001:7c0:2012:62::a2a2:181 Conectando con git.iws.uni-stuttgart.de (git.iws.uni-stuttgart.de)[129.69.98.181]:443... conectado. Petición HTTP enviada, esperando respuesta... 200 OK Longitud: 506 [text/plain] Grabando a: âcmake.optsâ cmake.opts 100%[===================>] 506 --.-KB/s en 0s 2018-07-16 09:57:27 (21,0 MB/s) - âcmake.optsâ guardado [506/506] ********************************************************************************************* (1/2) Cloning repositories. This may take a while. Make sure to be connected to the internet. ********************************************************************************************* Cloning into 'dune-common'... remote: Enumerating objects: 56350, done. remote: Counting objects: 100% (56350/56350), done. remote: Compressing objects: 100% (14627/14627), done. remote: Total 56350 (delta 42019), reused 55711 (delta 41557) Receiving objects: 100% (56350/56350), 13.28 MiB | 3.47 MiB/s, done. Resolving deltas: 100% (42019/42019), done. Checking connectivity... done. Cloning into 'dune-geometry'... remote: Enumerating objects: 5957, done. remote: Counting objects: 100% (5957/5957), done. remote: Compressing objects: 100% (1586/1586), done. remote: Total 5957 (delta 4397), reused 5870 (delta 4341) Receiving objects: 100% (5957/5957), 1.90 MiB | 2.41 MiB/s, done. Resolving deltas: 100% (4397/4397), done. Checking connectivity... done. Cloning into 'dune-grid'... remote: Enumerating objects: 75031, done. remote: Counting objects: 100% (75031/75031), done. remote: Compressing objects: 100% (17261/17261), done. remote: Total 75031 (delta 57886), reused 74601 (delta 57600) Receiving objects: 100% (75031/75031), 22.50 MiB | 4.02 MiB/s, done. Resolving deltas: 100% (57886/57886), done. Checking connectivity... done. Cloning into 'dune-localfunctions'... remote: Enumerating objects: 14413, done. remote: Counting objects: 100% (14413/14413), done. remote: Compressing objects: 100% (2978/2978), done. remote: Total 14413 (delta 11237), reused 14147 (delta 11066) Receiving objects: 100% (14413/14413), 1.89 MiB | 2.42 MiB/s, done. Resolving deltas: 100% (11237/11237), done. Checking connectivity... done. Cloning into 'dune-istl'... remote: Enumerating objects: 17464, done. remote: Counting objects: 100% (17464/17464), done. remote: Compressing objects: 100% (4290/4290), done. remote: Total 17464 (delta 13269), reused 17207 (delta 13089) Receiving objects: 100% (17464/17464), 2.76 MiB | 2.22 MiB/s, done. Resolving deltas: 100% (13269/13269), done. Checking connectivity... done. Cloning into 'dune-foamgrid'... remote: Enumerating objects: 3419, done. remote: Counting objects: 100% (3419/3419), done. remote: Compressing objects: 100% (869/869), done. remote: Total 3419 (delta 2551), reused 3377 (delta 2528) Receiving objects: 100% (3419/3419), 494.38 KiB | 0 bytes/s, done. Resolving deltas: 100% (2551/2551), done. Checking connectivity... done. Cloning into 'dune-alugrid'... remote: Enumerating objects: 27078, done. remote: Counting objects: 100% (27078/27078), done. remote: Compressing objects: 100% (5541/5541), done. remote: Total 27078 (delta 21468), reused 26974 (delta 21405) Receiving objects: 100% (27078/27078), 32.52 MiB | 3.11 MiB/s, done. Resolving deltas: 100% (21468/21468), done. Checking connectivity... done. Cloning into 'dune-subgrid'... remote: Counting objects: 3495, done. remote: Compressing objects: 100% (1103/1103), done. remote: Total 3495 (delta 2366), reused 3436 (delta 2310) Receiving objects: 100% (3495/3495), 579.57 KiB | 0 bytes/s, done. Resolving deltas: 100% (2366/2366), done. Checking connectivity... done. Cloning into 'dumux'... remote: Counting objects: 136516, done. remote: Compressing objects: 100% (28668/28668), done. remote: Total 136516 (delta 109249), reused 133151 (delta 107281) Receiving objects: 100% (136516/136516), 148.23 MiB | 4.83 MiB/s, done. Resolving deltas: 100% (109249/109249), done. Checking connectivity... done. Cloning into 'dumux-course'... remote: Counting objects: 819, done. remote: Compressing objects: 100% (346/346), done. remote: Total 819 (delta 530), reused 732 (delta 458) Receiving objects: 100% (819/819), 1.68 MiB | 943.00 KiB/s, done. Resolving deltas: 100% (530/530), done. Checking connectivity... done. ********************************************************************************************* (2/2) Configure dune modules and dumux. Build the dune libaries. This may take several minutes. ********************************************************************************************* ----- using default flags $CMAKE_FLAGS from /Volumes/MARY/DuMuX/dumux/cmake.opts ----- WARNING: could not find module 'dune-uggrid', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-uggrid' is suggested by dune-grid Skipping 'dune-uggrid'! WARNING: could not find module 'dune-uggrid', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-uggrid' is suggested by dune-grid Skipping 'dune-uggrid'! WARNING: could not find module 'dune-python', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-python' is suggested by dune-alugrid Skipping 'dune-python'! WARNING: could not find module 'dune-corepy', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-corepy' is suggested by dune-alugrid Skipping 'dune-corepy'! WARNING: could not find module 'dune-python', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-python' is suggested by dune-foamgrid Skipping 'dune-python'! WARNING: could not find module 'dune-uggrid', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-uggrid' is suggested by dumux Skipping 'dune-uggrid'! WARNING: could not find module 'opm-grid', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'opm-grid' is suggested by dumux Skipping 'opm-grid'! WARNING: could not find module 'dune-uggrid', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-uggrid' is suggested by dune-subgrid Skipping 'dune-uggrid'! WARNING: could not find module 'dune-python', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-python' is suggested by dune-alugrid Skipping 'dune-python'! WARNING: could not find module 'dune-corepy', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-corepy' is suggested by dune-alugrid Skipping 'dune-corepy'! WARNING: could not find module 'dune-python', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-python' is suggested by dune-foamgrid Skipping 'dune-python'! WARNING: could not find module 'dune-uggrid', module is also unknown to pkg-config. Maybe you need to adjust PKG_CONFIG_PATH! 'dune-uggrid' is suggested by dune-subgrid Skipping 'dune-uggrid'! --- going to build dune-common dune-geometry dune-grid dune-localfunctions dune-istl dune-alugrid dune-foamgrid dune-subgrid dumux dumux-course --- --- calling all for dune-common --- --- calling vcsetup for dune-common --- --> Installing Git pre-commit hook to enforce whitespace policy --- calling configure for dune-common --- cmake -DCMAKE_C_COMPILER=/usr/bin/gcc -DCMAKE_CXX_COMPILER=/usr/bin/g++ -DCMAKE_CXX_FLAGS_RELEASE=' -fno-strict-aliasing -fstrict-overflow -fno-finite-math-only -O3 -march=native -funroll-loops -g0 -Wall -Wno-deprecated -Wno-deprecated-declarations -Wno-sign-compare' -DCMAKE_CXX_FLAGS_DEBUG='-O0 -ggdb -Wall' -DCMAKE_BUILD_TYPE=Release "/Volumes/MARY/DuMuX/dumux/dune-common" -- The C compiler identification is AppleClang 7.0.2.7000181 -- The CXX compiler identification is AppleClang 7.0.2.7000181 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- The Fortran compiler identification is unknown -- Performing Test cxx_std_flag_17 -- Performing Test cxx_std_flag_17 - Failed -- Performing Test cxx_std_flag_1z -- Performing Test cxx_std_flag_1z - Success -- Performing Test compiler_supports_cxx17 -- Performing Test compiler_supports_cxx17 - Success -- Performing Test HAS_ATTRIBUTE_UNUSED -- Performing Test HAS_ATTRIBUTE_UNUSED - Success -- Performing Test HAS_ATTRIBUTE_DEPRECATED -- Performing Test HAS_ATTRIBUTE_DEPRECATED - Success -- Performing Test HAS_ATTRIBUTE_DEPRECATED_MSG -- Performing Test HAS_ATTRIBUTE_DEPRECATED_MSG - Success -- Performing Test HAVE_IS_INDEXABLE_SUPPORT -- Performing Test HAVE_IS_INDEXABLE_SUPPORT - Success -- Performing Test DUNE_HAVE_CXX_CLASS_TEMPLATE_ARGUMENT_DEDUCTION -- Performing Test DUNE_HAVE_CXX_CLASS_TEMPLATE_ARGUMENT_DEDUCTION - Failed -- Performing Test DUNE_HAVE_CXX_OPTIONAL -- Performing Test DUNE_HAVE_CXX_OPTIONAL - Failed -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- Performing Test STDTHREAD_WORKS -- Performing Test STDTHREAD_WORKS - Success -- Performing Test DUNE_SUPPORTS_CXX_THROW_IN_CONSTEXPR -- Performing Test DUNE_SUPPORTS_CXX_THROW_IN_CONSTEXPR - Success -- Looking for C++ include experimental/type_traits -- Looking for C++ include experimental/type_traits - found -- Looking for std::make_unique<int> -- Looking for std::make_unique<int> - found -- Looking for std::move<std::bool_constant<true>> -- Looking for std::move<std::bool_constant<true>> - not found -- Looking for std::move<std::experimental::bool_constant<true>> -- Looking for std::move<std::experimental::bool_constant<true>> - not found -- Looking for std::apply<std::negate<int>,std::tuple<int>> -- Looking for std::apply<std::negate<int>,std::tuple<int>> - not found -- Looking for std::experimental::apply<std::negate<int>,std::tuple<int>> -- Looking for std::experimental::apply<std::negate<int>,std::tuple<int>> - not found -- Looking for std::experimental::make_array<int,int> -- Looking for std::experimental::make_array<int,int> - not found -- Looking for std::move<std::experimental::detected_t<std::decay_t,int>> -- Looking for std::move<std::experimental::detected_t<std::decay_t,int>> - not found -- Performing Test HAVE_CXA_DEMANGLE -- Performing Test HAVE_CXA_DEMANGLE - Success -- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) -- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) CMake Error: CMAKE_Fortran_COMPILER not set, after EnableLanguage CMake Error at /usr/local/Cellar/cmake/3.11.4/share/cmake/Modules/FindMPI.cmake:1179 (try_compile): Failed to configure test project build system. Call Stack (most recent call first): /usr/local/Cellar/cmake/3.11.4/share/cmake/Modules/FindMPI.cmake:1196 (_MPI_try_staged_settings) /usr/local/Cellar/cmake/3.11.4/share/cmake/Modules/FindMPI.cmake:1382 (_MPI_check_lang_works) cmake/modules/DuneMPI.cmake:24 (find_package) cmake/modules/DuneMacros.cmake:705 (include) CMakeLists.txt:17 (dune_project) -- Configuring incomplete, errors occurred! See also "/Volumes/MARY/DuMuX/dumux/dune-common/build-cmake/CMakeFiles/CMakeOutput.log". See also "/Volumes/MARY/DuMuX/dumux/dune-common/build-cmake/CMakeFiles/CMakeError.log". --- Failed to build dune-common --- Terminating dunecontrol due to previous errors! ********************************************************************************************* Failed to build the dune libaries. ********************************************************************************************* macintosh-3:DuMuX mac$
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