Dear Anwar,
do you get the same problem for the box scheme and for the cell-centered
(TPFA) scheme,
or did you only try it with the Box scheme?
Regards,
Martin
On 10/05/2018 11:00 AM, Anwar Al Assadi wrote:
Hello everyone,
I'm trying to run my code on a cluster, but I got a segmentation
fault. I already ran the test_1pcctpfa problem parallel, but now after
changing the grid to 3 d (cake piece, with the cake creator) something
seems wrong. Did someone already have this problem? or do you have a
hint for me? I attached my code and the error message.
Thanks a lot!
Best,
Anwar
DuMux : dumux-course-2018
"""""""""
mpirun -np 1 ./test_1pcctpfa ./test_1pfv.input
You idiot! You signed the order to destroy Earth!
- Douglas Adams, HGttG
[eu-login-13-ng:15924] *** Process received signal ***
[eu-login-13-ng:15924] Signal: Segmentation fault (11)
[eu-login-13-ng:15924] Signal code: Address not mapped (1)
[eu-login-13-ng:15924] Failing at address: 0x80
[eu-login-13-ng:15924] [ 0]
/lib64/libpthread.so.0(+0xf6d0)[0x2b69fa3006d0]
[eu-login-13-ng:15924] [ 1]
./test_1pcctpfa(_ZNK4Dune9ALU3dGridILi3ELi3ELNS_20ALU3dGridElementTypeE7ENS_14ALUGridMPICommEE12leafIndexSetEv+0x0)[0x609c90]
[eu-login-13-ng:15924] [ 2]
./test_1pcctpfa(_ZN4Dune35MultipleCodimMultipleGeomTypeMapperINS_8GridViewINS_23ALU3dLeafGridViewTraitsIKNS_7ALUGridILi3ELi3ELNS_18ALUGridElementTypeE1ELNS_21ALUGridRefinementTypeE1ENS_14ALUGridMPICommEEELNS_21PartitionIteratorTypeE4EEEEENS_4Impl14MCMGFailLayoutEEC1ERKSB_RKSt8functionIFmNS_12GeometryTypeEiEE+0x25)[0x60bc25]
[eu-login-13-ng:15924] [ 3]
./test_1pcctpfa(_ZN5Dumux20CCTpfaFVGridGeometryIN4Dune8GridViewINS1_23ALU3dLeafGridViewTraitsIKNS1_7ALUGridILi3ELi3ELNS1_18ALUGridElementTypeE1ELNS1_21ALUGridRefinementTypeE1ENS1_14ALUGridMPICommEEELNS1_21PartitionIteratorTypeE4EEEEELb0ENS_31CCTpfaDefaultGridGeometryTraitsISC_NS_19DefaultMapperTraitsISC_NS1_35MultipleCodimMultipleGeomTypeMapperISC_NS1_4Impl14MCMGFailLayoutEEESI_EEEEEC2ERKSC_+0x54)[0x61b8f4]
[eu-login-13-ng:15924] [ 4] ./test_1pcctpfa(main+0x19b)[0x56f48b]
[eu-login-13-ng:15924] [ 5]
/lib64/libc.so.6(__libc_start_main+0xf5)[0x2b69fa52f445]
[eu-login-13-ng:15924] [ 6] ./test_1pcctpfa[0x573ae6]
[eu-login-13-ng:15924] *** End of error message ***
-------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
-------------------------------------------------------
--------------------------------------------------------------------------
mpirun noticed that process rank 0 with PID 0 on node eu-login-13-ng
exited on signal 11 (Segmentation fault)."""""""""""""""""""""""
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--
M.Sc. Martin Schneider
University of Stuttgart
Institute for Modelling Hydraulic and Environmental Systems
Department of Hydromechanics and Modelling of Hydrosystems
Pfaffenwaldring 61
D-70569 Stuttgart
Tel: (+49) 0711/ 685-69159
Fax: (+49) 0711/ 685-60430
E-Mail: [email protected]
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