Hello Kilian, I tried this and the error message did not occur. Another strange thing is, that it seems to be slower with mpirun than without.
Regards Kai Am Di., 16. Juni 2020 um 12:00 Uhr schrieb < [email protected]>: > Send Dumux mailing list submissions to > [email protected] > > To subscribe or unsubscribe via the World Wide Web, visit > https://listserv.uni-stuttgart.de/mailman/listinfo/dumux > or, via email, send a message with subject or body 'help' to > [email protected] > > You can reach the person managing the list at > [email protected] > > When replying, please edit your Subject line so it is more specific > than "Re: Contents of Dumux digest..." > > > Today's Topics: > > 1. Re: Problem when using mpirun on a cluster (Kilian Weishaupt) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Tue, 16 Jun 2020 07:49:40 +0200 > From: Kilian Weishaupt <[email protected]> > To: [email protected] > Subject: Re: [DuMuX] Problem when using mpirun on a cluster > Message-ID: > <[email protected]> > Content-Type: text/plain; charset="utf-8"; Format="flowed" > > Hi Kai, > > do you get the same error if you try to run the simulation locally on > your computer, using e.g. only two cores? > > Regards > Kilian > > Am 15.06.20 um 11:28 schrieb Kai Wendel: > > Hello, > > > > when trying to run a parallel? simulation on a cluster by using > > mpirun, I get the following error message: > > Dune reported error: Dune::IOError > > [VectorP0VTKFunction:/temp/kaiw/DUMUX/dumux/dumux/io/vtkfunction.hh:99]: > > VectorP0VTKFunction: size mismatch between field process rank (32160) > > and mapper (17952) ---> Abort! > > > > I tried also to actualize all versions, but the problem remains. > > I did the following commands: > > > > srun -n 6 --pty /bin/bash > > srun mpirun -n 6 ?REMEDIATION_3D_cake > > > > Greetings > > Kai Wendel > > > > _______________________________________________ > > Dumux mailing list > > [email protected] > > https://listserv.uni-stuttgart.de/mailman/listinfo/dumux > > -- > %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% > Kilian Weishaupt M.Sc. > Institut f?r Wasser- und Umweltsystemmodellierung (IWS) > Lehrstuhl f?r Hydromechanik und Hydrosystemmodellierung > Universit?t Stuttgart, Pfaffenwaldring 61, 70569 Stuttgart > Email: [email protected] > Telefon: 0049 711 685-60461 ** fax: 0049-711-685-60430 > http://www.hydrosys.uni-stuttgart.de > %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% > > -------------- next part -------------- > An HTML attachment was scrubbed... > URL: < > http://listserv.uni-stuttgart.de/pipermail/dumux/attachments/20200616/34f40f3d/attachment-0001.htm > > > > ------------------------------ > > Subject: Digest Footer > > _______________________________________________ > Dumux mailing list > [email protected] > https://listserv.uni-stuttgart.de/mailman/listinfo/dumux > > > ------------------------------ > > End of Dumux Digest, Vol 112, Issue 10 > ************************************** >
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