So I just did a symbolic link from lmod to modulecmd. Looks like
there was some issues. Any ideas?
-- Andy
$ eb DOLFIN-1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb
== temporary log file in case of crash /tmp/easybuild-UFxEYV.log
== resolving dependencies ...
ERROR: EasyBuild crashed with an error (at
easybuild/1.2.0/lib/python2.7/site-packages/easybuild_framework-1.2.0-py2.7.egg/easybuild/main.py:514
in resolve_dependencies): Dependencies not met. Cannot resolve
[('SuiteSparse', '3.7.0-goalf-1.1.0-no-OFED-withparmetis'), ('zlib',
'1.2.7-goalf-1.1.0-no-OFED'), ('UFL',
'1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Trilinos',
'10.12.2-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Boost',
'1.49.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('ParMETIS',
'4.0.2-goalf-1.1.0-no-OFED'), ('CGAL',
'4.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Python',
'2.7.3-goalf-1.1.0-no-OFED'), ('UFC',
'2.0.5-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Armadillo',
'2.4.4-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Instant',
'1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('FFC',
'1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('goalf', '1.1.0-no-OFED'),
('FIAT', '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Viper',
'1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SLEPc',
'3.3-p1-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SWIG',
'2.0.4-goalf-1.1.0-no-OFED-Python-2.7.3'), ('CMake',
'2.8.4-goalf-1.1.0-no-OFED'), ('libxml2',
'2.8.0-goalf-1.1.0-no-OFED'), ('Sphinx',
'1.1.3-goalf-1.1.0-no-OFED-Python-2.7.3'), ('MTL4', '4.0.8878'),
('PETSc', '3.3-p2-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SCOTCH',
'5.1.12b_esmumps-goalf-1.1.0-no-OFED')]
$ cat /tmp/easybuild-UFxEYV.log
== 2013-03-22 21:16:02,590 main INFO This is EasyBuild 1.2.0
(framework: 1.2.0, easyblocks: 1.2.0) on host sandy.ices.utexas.edu.
== 2013-03-22 21:16:02,694 main.easybuild_config INFO Logger started
for easybuild_config.
== 2013-03-22 21:16:02,696 main.config INFO Extended MODULEPATH with
module install path used by EasyBuild:
/h1/aterrel/.local/easybuild/modules/all:/workspace/opt/modulefiles:/opt/apps/ossw/derived_modulefiles/sl6/intel/12.1/modulefiles:/opt/apps/ossw/derived_modulefiles/sl6/modulefiles:/opt/apps/sysnet/modulefiles:/opt/apps/ossw/modulefiles
== 2013-03-22 21:16:02,732 main INFO Found
DOLFIN-1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb in
/workspace/opt/apps/easybuild/1.2.0/lib/python2.7/site-packages/easybuild_easyconfigs-1.2.0.0-py2.7.egg/easybuild/easyconfigs:
/workspace/opt/apps/easybuild/1.2.0/lib/python2.7/site-packages/easybuild_easyconfigs-1.2.0.0-py2.7.egg/easybuild/easyconfigs/d/DOLFIN/DOLFIN-1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3.eb
== 2013-03-22 21:16:02,734 main.EasyConfig INFO Obtained list of valid
module classes: ['base', 'bio', 'chem', 'compiler', 'lib', 'phys',
'tools']
== 2013-03-22 21:16:02,740 main.EasyConfig INFO setting config option
toolchain: value {'version': '1.1.0-no-OFED', 'name': 'goalf'}
== 2013-03-22 21:16:02,741 main.EasyConfig INFO setting config option
name: value DOLFIN
== 2013-03-22 21:16:02,741 main.EasyConfig INFO setting config option
sources: value ['dolfin-1.0.0.tar.gz']
== 2013-03-22 21:16:02,742 main.EasyConfig INFO setting config option
versionsuffix: value -Python-2.7.3
== 2013-03-22 21:16:02,742 main.EasyConfig INFO setting config option
version: value 1.0.0
== 2013-03-22 21:16:02,744 main.EasyConfig INFO setting config option
dependencies: value [('Python', '2.7.3'), ('Boost', '1.49.0',
'-Python-2.7.3'), ('UFC', '2.0.5', '-Python-2.7.3'), ('SWIG', '2.0.4',
'-Python-2.7.3'), ('FFC', '1.0.0', '-Python-2.7.3'), ('FIAT', '1.0.0',
'-Python-2.7.3'), ('Instant', '1.0.0', '-Python-2.7.3'), ('Viper',
'1.0.0', '-Python-2.7.3'), ('UFL', '1.0.0', '-Python-2.7.3'),
('SCOTCH', '5.1.12b_esmumps'), ('Armadillo', '2.4.4',
'-Python-2.7.3'), ('ParMETIS', '4.0.2'), ('SuiteSparse', '3.7.0',
'-withparmetis'), ('CGAL', '4.0', '-Python-2.7.3'), ('PETSc',
'3.3-p2', '-Python-2.7.3'), ('SLEPc', '3.3-p1', '-Python-2.7.3'),
('MTL4', '4.0.8878', '', True), ('Trilinos', '10.12.2',
'-Python-2.7.3'), ('Sphinx', '1.1.3', '-Python-2.7.3'), ('zlib',
'1.2.7'), ('libxml2', '2.8.0')]
== 2013-03-22 21:16:02,744 main.EasyConfig INFO setting config option
source_urls: value
['https://launchpad.net/dolfin/1.0.x/1.0.0/+download']
== 2013-03-22 21:16:02,745 main.EasyConfig INFO setting config option
toolchainopts: value {'usempi': True, 'pic': True,
'packed-linker-options': False}
== 2013-03-22 21:16:02,745 main.EasyConfig INFO setting config option
homepage: value https://launchpad.net/dolfin
== 2013-03-22 21:16:02,746 main.EasyConfig INFO setting config option
patches: value ['wl_pkg_linkflags.patch', 'petsc-slepc-libs.patch']
== 2013-03-22 21:16:02,746 main.EasyConfig INFO setting config option
builddependencies: value [('CMake', '2.8.4')]
== 2013-03-22 21:16:02,747 main.EasyConfig INFO setting config option
description: value DOLFIN is the C++/Python interface of FEniCS,
providing a consistent PSE
(Problem Solving Environment) for ordinary and partial differential equations.
== 2013-03-22 21:16:02,747 main.EasyConfig INFO Validating easy block
== 2013-03-22 21:16:02,747 main.EasyConfig INFO Checking OS dependencies
== 2013-03-22 21:16:02,748 main.EasyConfig INFO OS dependencies ok: []
== 2013-03-22 21:16:02,748 main.EasyConfig INFO Checking skipsteps
== 2013-03-22 21:16:02,750 main.search_toolchain INFO Logger started
for search_toolchain.
== 2013-03-22 21:16:02,791 main.Goalf INFO _get_optimal_architecture:
using march=native as optarch for Intel.
== 2013-03-22 21:16:02,796 main.Modules INFO Logger started for Modules.
== 2013-03-22 21:16:02,807 main INFO resolving dependencies ...
== 2013-03-22 21:16:02,808 main.Modules INFO Logger started for Modules.
== 2013-03-22 21:16:02,818 main WARNING No installed modules. Your
MODULEPATH is probably incomplete:
/h1/aterrel/.local/easybuild/modules/all:/workspace/opt/modulefiles:/opt/apps/ossw/derived_modulefiles/sl6/intel/12.1/modulefiles:/opt/apps/ossw/derived_modulefiles/sl6/modulefiles:/opt/apps/sysnet/modulefiles:/opt/apps/ossw/modulefiles
== 2013-03-22 21:16:02,818 main ERROR EasyBuild crashed with an error
(at
easybuild/1.2.0/lib/python2.7/site-packages/easybuild_framework-1.2.0-py2.7.egg/easybuild/main.py:514
in resolve_dependencies): Dependencies not met. Cannot resolve
[('SuiteSparse', '3.7.0-goalf-1.1.0-no-OFED-withparmetis'), ('zlib',
'1.2.7-goalf-1.1.0-no-OFED'), ('UFL',
'1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Trilinos',
'10.12.2-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Boost',
'1.49.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('ParMETIS',
'4.0.2-goalf-1.1.0-no-OFED'), ('CGAL',
'4.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Python',
'2.7.3-goalf-1.1.0-no-OFED'), ('UFC',
'2.0.5-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Armadillo',
'2.4.4-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Instant',
'1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('FFC',
'1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('goalf', '1.1.0-no-OFED'),
('FIAT', '1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('Viper',
'1.0.0-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SLEPc',
'3.3-p1-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SWIG',
'2.0.4-goalf-1.1.0-no-OFED-Python-2.7.3'), ('CMake',
'2.8.4-goalf-1.1.0-no-OFED'), ('libxml2',
'2.8.0-goalf-1.1.0-no-OFED'), ('Sphinx',
'1.1.3-goalf-1.1.0-no-OFED-Python-2.7.3'), ('MTL4', '4.0.8878'),
('PETSc', '3.3-p2-goalf-1.1.0-no-OFED-Python-2.7.3'), ('SCOTCH',
'5.1.12b_esmumps-goalf-1.1.0-no-OFED')]
On Fri, Mar 22, 2013 at 4:25 PM, Kenneth Hoste <[email protected]> wrote:
> Hi Andy,
>
> On 22 Mar 2013, at 22:12, Andy Ray Terrel wrote:
>
>> Hello,
>>
>> Was support for lmod ever added? My current machine uses it instead
>> of environment modules.
>
> No, unfortunately not yet, see also
> https://github.com/hpcugent/easybuild-framework/issues/110.
>
> However, since lmod is compatible with Tcl modules as used by the environment
> modules package, it may work with the current EasyBuild codebase...
>
> As far as I know, the lmod 'modulecmd' offers the same command line interface
> as the environment modules one.
> And lmod can handle Tcl modules, which is what EasyBuild currently produces.
>
> Maybe you should just give it a try, and see what happens?
>
> In any case, we are still interesting in decent lmod support in EasyBuild,
> and hope to play around with it soon.
>
> We think lmod can help us in our search for a tool to handle the huge set of
> modules that you can easily obtain using EasyBuild,
> so it's pretty high on our list of things to look at.
>
> If you would be willing/able to help us out there, that would be fantastic.
> Let me know if you think we should talk about it (e.g., set up a conf call or
> something).
>
>
> regards,
>
> Kenneth
>
