Well, I tried removing and reinstalling easybuild. Here is the output I get:
armando-mbp:q armando$ sudo pip install http://github.com/hpcugent/easybuild/archive/master.tar.gz The directory '/Users/armando/Library/Caches/pip/http' or its parent directory is not owned by the current user and the cache has been disabled. Please check the permissions and owner of that directory. If executing pip with sudo, you may want sudo's -H flag. The directory '/Users/armando/Library/Caches/pip/http' or its parent directory is not owned by the current user and the cache has been disabled. Please check the permissions and owner of that directory. If executing pip with sudo, you may want sudo's -H flag. Collecting http://github.com/hpcugent/easybuild/archive/master.tar.gz Downloading http://github.com/hpcugent/easybuild/archive/master.tar.gz (258kB) 100% |����������������������������������������������������������������| 262kB 1.9MB/s Collecting easybuild-easyconfigs==2.1.1 (from easybuild==2.1.1) Downloading easybuild-easyconfigs-2.1.1.tar.gz (824kB) 100% |����������������������������������������������������������������| 827kB 680kB/s Collecting easybuild-easyblocks==2.1.1 (from easybuild==2.1.1) Downloading easybuild-easyblocks-2.1.1.tar.gz (202kB) 100% |����������������������������������������������������������������| 204kB 2.7MB/s Collecting easybuild-framework==2.1.1 (from easybuild==2.1.1) Downloading easybuild-framework-2.1.1.tar.gz (1.3MB) 100% |����������������������������������������������������������������| 1.3MB 456kB/s Requirement already satisfied (use --upgrade to upgrade): vsc-base>=2.2.0 in /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages (from easybuild-framework==2.1.1->easybuild==2.1.1) Requirement already satisfied (use --upgrade to upgrade): setuptools in /opt/local/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages (from vsc-base>=2.2.0->easybuild-framework==2.1.1->easybuild==2.1.1) Installing collected packages: easybuild-framework, easybuild-easyblocks, easybuild-easyconfigs, easybuild Running setup.py install for easybuild-framework Running setup.py install for easybuild-easyblocks Running setup.py install for easybuild-easyconfigs Running setup.py install for easybuild Successfully installed easybuild-2.1.1 easybuild-easyblocks-2.1.1 easybuild-easyconfigs-2.1.1 easybuild-framework-2.1.1 armando-mbp:q armando$ eb ebb ebong ebrowse Still no signs of eb executable. Regards -- amit ________________________________ From: [email protected] [[email protected]] on behalf of Kenneth Hoste [[email protected]] Sent: Tuesday, June 30, 2015 3:14 AM To: [email protected] Subject: Re: [easybuild] EasyBuild Newbie questions Hello, On 30/06/15 01:06, Amit Goel wrote: Thanks a lot for response pablo. I did install all three of them using the command: pip install <http://github.com/hpcugent/easybuild-framework/archive/master.tar.gz> http://github.com/hpcugent/easybuild-framework/archive/master.tar.gz<http://github.com/hpcugent/easybuild-framework/archive/master.tar.gz>http://github.com/hpcugent/easybuild-framework/archive/master.tar.gz I did follow and search for solution in documentation but could not find how to get eb command now. I also did a complete search of my mac but did not find eb command. Any ideas where the eb command could be hidden / installed by default ? If you executed pip with administrator privileges, the 'eb' command should be installed in /usr/local/bin, most likely. When installing easybuild-framework, the location will be mentioned in the output that pip produces. regards, Kenneth Regards -- amit ________________________________ From: [email protected]<mailto:[email protected]> [[email protected]<mailto:[email protected]>] on behalf of Pablo Escobar Lopez [[email protected]<mailto:[email protected]>] Sent: Monday, June 29, 2015 5:20 PM To: [email protected]<mailto:[email protected]> Subject: Re: [easybuild] EasyBuild Newbie questions Hola Armando, That command line will install only the framework but you need to install also the easyblocks and easyconfigs to have a fully working easybuild setup. These are the three things you need to get installed (plus a modules system like Lmod) https://github.com/hpcugent/easybuild-framework https://github.com/hpcugent/easybuild-easyblocks https://github.com/hpcugent/easybuild-easyconfigs The recommended installation method is described in the documentation. I suggest you to take a look at it https://easybuild.readthedocs.org/en/latest/Installation.html un saludo, Pablo. 2015-06-29 20:14 GMT+02:00 Armando Fandango <[email protected]<mailto:[email protected]>>: Hi I have installed easybuild using the following command option: pip install http://github.com/hpcugent/easybuild-framework/archive/master.tar.gz However, now I do not have eb command anywhere on my system. I searched but could not find anything on help file regarding this method of installation. Please advise. Regards -- armando -- Pablo Escobar López HPC systems engineer Biozentrum, University of Basel Swiss Institute of Bioinformatics SIB Email: <mailto:[email protected]> [email protected]<mailto:[email protected]> Phone: +41 61 267 21 80 http://www.biozentrum.unibas.ch
