Howdy Niek,
Try this:
1) add the line
options = {'modulename': 'vcf'}
2) remove your "sanity_check_commands" line.
By default, the PythonPackage easyblock will
try to import it (using the name above) during
sanity checking
See Biopython (among others) for an example.
Jack Perdue
Lead Systems Administrator
High Performance Research Computing
TAMU Division of Research
[email protected] http://sc.tamu.edu
SC Helpdesk: [email protected]
On 02/22/2016 03:53 PM, Niek de Klein wrote:
Hi alI,
I am trying to install PyVCF
(https://pypi.python.org/pypi/PyVCF/0.6.7) which is imported with
import vcf
instead of
import pyvcf
The problem I have is that when I use
sanity_check_commands = [('python', '-c "import vcf"')]
the easyblock PythonPackage still uses
python -c "import pyvcf"
as sanity command as well.
I could only find an open issue
(https://github.com/hpcugent/easybuild-easyconfigs/issues/1205)
regarding this, anyone know how I can work around this?
Cheers,
Niek
