There is a bug fix for it: https://access.redhat.com/errata/RHBA-2017:3296
Damian PS: I didn’t see the title of the subject before………….. what was the original poster thinking about….? ;-) From: <[email protected]> on behalf of "Strube, Alexandre" <[email protected]> Reply-To: <[email protected]> Date: Monday 20 November 2017 at 16:34 To: "[email protected]" <[email protected]> Subject: Re: [easybuild] Redhead/CentOS 7.4 and Intel compiler issues Correct. You can test if your system is affected by running the code attached to the issue on Redhat’s ticket system: https://bugzilla.redhat.com/attachment.cgi?id=1334984 dr. Alexandre Strube [email protected] Jülich Supercomputing Centre Institute for Advanced Simulation Forschungszentrum Juelich GmbH 52425 Jülich, Germany Phone: +49 2461 61-3866 Fax: +49 2461 61-6656 JSC is the coordinator of the John von Neumann Institute for Computing (NIC) and member of the Gauss Centre for Supercomputing (GCS) On 20. Nov 2017, at 16:17, Åke Sandgren <[email protected]> wrote: The bug affects (as far as i understand it) code built by intel compilers from before 17.0 to 18.0 running on systems with the new glibc. I.e., regardless of where they were built. libc is almost always dynamically loaded. On 11/20/2017 04:14 PM, John-Paul Robinson wrote: Could someone clarify if this bug also affects software built with Intel on CentOS/RedHat 7.3 and then run on the 7.4 OS versions? Or is this only affecting new builds on 7.4 with the Intel compilers. In other words, does it break software built with Intel on prior OS releases an run on the 7.4 release. It's not clear from the bug reports or work around. Thanks for the clarification, ~jpr On 11/13/2017 04:03 AM, Strube, Alexandre wrote: If possible, you can upgrade glibc with this patch: https://copr.fedorainfracloud.org/coprs/fweimer/glibc-rhel-7.5/ The other workaround is to set LD_BIND_NOW=1, but this kills SLURM. So, if you meet this bug, and are using slurm, try something like “srun --export=LD_BIND_NOW=1 ….” in your batch script. It solves the issue. dr. Alexandre Strube [email protected]<mailto:[email protected]> <mailto:[email protected]> Jülich Supercomputing Centre Institute for Advanced Simulation Forschungszentrum Juelich GmbH 52425 Jülich, Germany Phone: +49 2461 61-3866 Fax: +49 2461 61-6656 JSC is the coordinator of the John von Neumann Institute for Computing (NIC) and member of the Gauss Centre for Supercomputing (GCS) On 13. Nov 2017, at 09:21, Paul Melis <[email protected]<mailto:[email protected]> <mailto:[email protected]>> wrote: A related link at intel, with references to relevant glibc bug reports, is https://software.intel.com/en-us/articles/intel-compiler-not-compatible-with-glibc-224-9-and-newer. I don't think this has caused issues at our place yet, but it's definitely screwing up the plans for an update to RHEL 7.4 :-/ Paul On 12-11-17 20:59, Joachim Hein wrote: We got bitten by: https://software.intel.com/en-us/articles/inconsistent-program-behavior-on-red-hat-enterprise-linux-74-if-compiled-with-intel We are running CentOS 7.4. Many of our intel build apps are not working any longer. Best wishes Joachim Sent from my nanoPad -- Paul Melis | Visualization group leader & developer | SURFsara | | Science Park 140 | 1098 XG Amsterdam | | T 020 800 1312 | [email protected]<mailto:[email protected]> <mailto:[email protected]> | www.surfsara.nl<http://www.surfsara.nl/> <http://www.surfsara.nl<http://www.surfsara.nl/>> | -- Ake Sandgren, HPC2N, Umea University, S-90187 Umea, Sweden Internet: [email protected]<mailto:[email protected]> Phone: +46 90 7866134 Fax: +46 90-580 14 Mobile: +46 70 7716134 WWW: http://www.hpc2n.umu.se<http://www.hpc2n.umu.se/> ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------
