Hi Davide,
On 04/01/2018 22:36, Vanzo, Davide wrote:
Hello EasyBuilders!
Background: at our site we install Python (2.x.y and 3.x.y) without
numpy so that we can bump it down from foss to GCC and from intel to
iccifort. Then numpy is built as a separate module with the foss and
intel toolchains. Same for scipy, mpi4py and pandas.
For some reason that I cannot understand I am getting the error below
when I try to install numpy with the intel-2016b toolchain. If I try
to run the same python command manually, it works fine. Any idea?
Attached you can find the full log with debug and the easyconfig file
I am using.
The "exit 11" points in the direction of a segmentation fault, so did
you properly replace libintlc.so.5 in the icc, ifort *and* imkl
installations included in the intel/2016b toolchain, as discussed in a
previous post (cfr.
https://lists.ugent.be/wws/arc/easybuild/2018-01/msg00012.html)?
Maybe the problem only occurs with numpy because that needs imkl while
your Python build doesn't since it was built with iccifort?
regards,
Kenneth
Thanks!
--
*Davide Vanzo, PhD*
Application Developer
Adjunct Assistant Professor of Chemical and Biomolecular Engineering
Advanced Computing Center for Research and Education (ACCRE)
Vanderbilt University - Hill Center 201
(615)-875-9137
www.accre.vanderbilt.edu
