HI Alan, Thanks for the tip! I didn't remember the "modaltsoftname" option and using it worked fine and I could build the module.
I guess you are right and my easyconfig modifications were breaking the EBROOTPYTHON env var which probably is used by the numpy easyblock. Thanks! Pablo. 2018-01-12 9:27 GMT+01:00 Alan O'Cais <[email protected]>: > Hmm, I wonder if you would be better off using modaltsoftname rather than > changing the name of the software, your approach could kick off some > problems with EBROOTPYTHON perhaps? > > Alan > > On 11 January 2018 at 13:12, Pablo Escobar Lopez < > [email protected]> wrote: > >> Hi, >> >> One of my users needs to load both python2 and python3 modules together >> so I tried to install a custom python3 module named Python3. The main >> modification I did in the easyconfig are: >> >> easyblock = 'EB_Python' >> name = 'Python3' >> sources = ['Python-%(version)s.tgz'] >> >> The main installation of python3 works ok but in the extensions part I >> have a weird problem when building numpy >> >> "gcc: error: unrecognized command line option ‘-fstack-protector-strong’" >> "cmd "/bin/python2 setup.py config" exited with exitcode 1 and output" >> >> This is the full log: >> https://gist.github.com/anonymous/8e4b0f91b6d4a264c8628f6c63f25114 >> >> any explanation about why the system python2 binary is being used? Any >> suggestion about how to solve it? >> >> Do you recommend a different approach to be able to load both python2 and >> python3 modules together? >> >> regards, >> Pablo. >> >> >> -- >> Pablo Escobar López >> HPC systems engineer >> sciCORE, University of Basel >> SIB Swiss Institute of Bioinformatics >> http://scicore.unibas.ch >> > > > > -- > Dr. Alan O'Cais > E-CAM Software Manager > Juelich Supercomputing Centre > Forschungszentrum Juelich GmbH > 52425 Juelich, Germany > > Phone: +49 2461 61 5213 <+49%202461%20615213> > Fax: +49 2461 61 6656 <+49%202461%20616656> > E-mail: [email protected] > WWW: http://www.fz-juelich.de/ias/jsc/EN > > > ------------------------------------------------------------ > ------------------------------------ > ------------------------------------------------------------ > ------------------------------------ > Forschungszentrum Juelich GmbH > 52425 Juelich > Sitz der Gesellschaft: Juelich > Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 > Vorsitzender des Aufsichtsrats: MinDir Dr. Karl Eugen Huthmacher > Geschaeftsfuehrung: Prof. Dr.-Ing. Wolfgang Marquardt (Vorsitzender), > Karsten Beneke (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, > Prof. Dr. Sebastian M. Schmidt > ------------------------------------------------------------ > ------------------------------------ > ------------------------------------------------------------ > ------------------------------------ > > -- Pablo Escobar López HPC systems engineer sciCORE, University of Basel SIB Swiss Institute of Bioinformatics http://scicore.unibas.ch
